Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD4O95243 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
MBD4O95243 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.7■□□□□ 0.9
MBD4O95243 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD4O95243 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD4O95243 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MBD4O95243 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
MBD4O95243 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 MIR940-201ENST00000401276 94 ntBASIC20.69■□□□□ 0.9
MBD4O95243 AC108073.2-201ENST00000464002 357 ntBASIC20.69■□□□□ 0.9
MBD4O95243 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MBD4O95243 IGHV3-65-201ENST00000523210 341 ntBASIC20.69■□□□□ 0.9
MBD4O95243 AC008667.4-201ENST00000607370 168 ntBASIC20.69■□□□□ 0.9
MBD4O95243 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
MBD4O95243 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD4O95243 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MBD4O95243 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD4O95243 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.69■□□□□ 0.9
MBD4O95243 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
MBD4O95243 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MBD4O95243 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
MBD4O95243 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD4O95243 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 PMS2P1-201ENST00000431037 1228 ntBASIC20.68■□□□□ 0.9
MBD4O95243 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD4O95243 POLD2P1-201ENST00000511220 997 ntBASIC20.68■□□□□ 0.9
MBD4O95243 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.68■□□□□ 0.9
MBD4O95243 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MBD4O95243 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
MBD4O95243 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MBD4O95243 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.68■□□□□ 0.9
MBD4O95243 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD4O95243 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.67■□□□□ 0.9
MBD4O95243 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 KRT18P58-201ENST00000527480 1120 ntBASIC20.67■□□□□ 0.9
MBD4O95243 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.67■□□□□ 0.9
MBD4O95243 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MBD4O95243 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MBD4O95243 AC140113.2-201ENST00000604370 208 ntBASIC20.67■□□□□ 0.9
MBD4O95243 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.67■□□□□ 0.9
MBD4O95243 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD4O95243 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
MBD4O95243 PP12613-201ENST00000424958 2230 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms