Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK1BO75841 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK1BO75841 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK1BO75841 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 AC036111.1-201ENST00000533973 1582 ntBASIC15.15■□□□□ 0.02
UPK1BO75841 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK1BO75841 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 AC138035.3-201ENST00000622706 2791 ntBASIC15.15■□□□□ 0.02
UPK1BO75841 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK1BO75841 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
UPK1BO75841 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
UPK1BO75841 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.15■□□□□ 0.02
UPK1BO75841 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.15■□□□□ 0.02
UPK1BO75841 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.15■□□□□ 0.02
UPK1BO75841 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
UPK1BO75841 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
UPK1BO75841 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.15■□□□□ 0.02
UPK1BO75841 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 AC120498.8-201ENST00000614275 531 ntBASIC15.15■□□□□ 0.02
UPK1BO75841 AC008622.2-201ENST00000617006 1229 ntBASIC15.15■□□□□ 0.02
UPK1BO75841 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.15■□□□□ 0.02
UPK1BO75841 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1BO75841 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1BO75841 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UPK1BO75841 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.14■□□□□ 0.01
UPK1BO75841 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.14■□□□□ 0.01
UPK1BO75841 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.14■□□□□ 0.01
UPK1BO75841 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1BO75841 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1BO75841 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms