Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA12O60330 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 AC254562.1-201ENST00000417586 456 ntBASIC17.24■□□□□ 0.35
PCDHGA12O60330 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA12O60330 AL353593.2-201ENST00000602529 1483 ntBASIC17.24■□□□□ 0.35
PCDHGA12O60330 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHGA12O60330 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PRSS29P-201ENST00000440800 595 ntBASIC17.23■□□□□ 0.35
PCDHGA12O60330 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 DUTP2-201ENST00000519164 463 ntBASIC17.23■□□□□ 0.35
PCDHGA12O60330 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 C20orf181-201ENST00000623918 480 ntBASIC17.23■□□□□ 0.35
PCDHGA12O60330 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA12O60330 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA12O60330 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 VN2R19P-201ENST00000442399 1052 ntBASIC17.22■□□□□ 0.35
PCDHGA12O60330 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA12O60330 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 SNHG9-202ENST00000564014 471 ntBASIC17.22■□□□□ 0.35
PCDHGA12O60330 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 LINC00896-202ENST00000609602 2128 ntBASIC17.22■□□□□ 0.35
PCDHGA12O60330 AL596442.2-201ENST00000610240 980 ntBASIC17.22■□□□□ 0.35
PCDHGA12O60330 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA12O60330 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms