Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 AC069262.1-201ENST00000539058 672 ntBASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 AC005412.3-201ENST00000580309 715 ntBASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 AL161645.1-201ENST00000622716 1255 ntBASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 AC098818.2-201ENST00000564925 2320 ntBASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH11XQ9BZA7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 DUX4L17-201ENST00000557360 1267 ntBASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 LINC00304-203ENST00000565008 1864 ntBASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH11XQ9BZA7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 HMGA1P7-201ENST00000406908 502 ntBASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 SPCS2P4-201ENST00000436160 681 ntBASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH11XQ9BZA7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 KLF2P3-201ENST00000451977 1087 ntBASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH11XQ9BZA7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms