Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
FNDC9Q8TBE3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
FNDC9Q8TBE3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
FNDC9Q8TBE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
FNDC9Q8TBE3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 HLA-A-201ENST00000376802 1334 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AC079776.2-201ENST00000641154 1609 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AC018712.1-201ENST00000455767 687 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AC021087.4-201ENST00000563761 564 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AC012317.2-201ENST00000623305 2251 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AL353593.2-201ENST00000602529 1483 ntBASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
FNDC9Q8TBE3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AL031284.1-201ENST00000419297 478 ntBASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 BX005266.1-201ENST00000473402 457 ntBASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AP001005.1-201ENST00000571755 1248 ntBASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AC004817.3-201ENST00000602957 2129 ntBASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FNDC9Q8TBE3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 AC132938.5-201ENST00000624980 1813 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 OR6D1P-203ENST00000641209 4860 ntBASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
FNDC9Q8TBE3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms