Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HTR1EP28566 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 AC116353.5-201ENST00000638148 1699 ntBASIC16.7■□□□□ 0.26
HTR1EP28566 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 AC016734.2-201ENST00000624325 1377 ntBASIC16.7■□□□□ 0.26
HTR1EP28566 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 AC113404.2-201ENST00000507884 177 ntBASIC16.7■□□□□ 0.26
HTR1EP28566 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.7■□□□□ 0.26
HTR1EP28566 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.7■□□□□ 0.26
HTR1EP28566 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.7■□□□□ 0.26
HTR1EP28566 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.7■□□□□ 0.26
HTR1EP28566 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HTR1EP28566 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.7■□□□□ 0.26
HTR1EP28566 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.7■□□□□ 0.26
HTR1EP28566 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
HTR1EP28566 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HTR1EP28566 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 LYSMD4-203ENST00000378904 2122 ntBASIC16.69■□□□□ 0.26
HTR1EP28566 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HTR1EP28566 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HTR1EP28566 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.69■□□□□ 0.26
HTR1EP28566 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 MIR3180-1-201ENST00000580374 94 ntBASIC16.69■□□□□ 0.26
HTR1EP28566 MIR3180-3-201ENST00000584616 94 ntBASIC16.69■□□□□ 0.26
HTR1EP28566 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.69■□□□□ 0.26
HTR1EP28566 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HTR1EP28566 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.69■□□□□ 0.26
HTR1EP28566 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HTR1EP28566 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.68■□□□□ 0.26
HTR1EP28566 KRT8P47-201ENST00000604727 1398 ntBASIC16.68■□□□□ 0.26
HTR1EP28566 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HTR1EP28566 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.68■□□□□ 0.26
HTR1EP28566 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.68■□□□□ 0.26
HTR1EP28566 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.68■□□□□ 0.26
HTR1EP28566 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HTR1EP28566 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HTR1EP28566 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms