Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 SLC25A39P2-201ENST00000537614 270 ntBASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 AL390754.1-201ENST00000619088 582 ntBASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.75■■□□□ 1.07
CNTNAP4Q9C0A0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 IGHV3-62-201ENST00000520057 340 ntBASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 LINC01451-201ENST00000623792 534 ntBASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP4Q9C0A0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 GAPDHP21-201ENST00000450301 1010 ntBASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 LINC02560-201ENST00000596379 459 ntBASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.73■■□□□ 1.07
CNTNAP4Q9C0A0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 UXT-AS1-201ENST00000590504 1525 ntBASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.72■■□□□ 1.07
CNTNAP4Q9C0A0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms