Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 AL353807.1-201ENST00000427475 662 ntBASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 RARRES2P10-201ENST00000564312 460 ntBASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 CYP2T1P-202ENST00000641596 2535 ntBASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NIPSNAP3BQ9BS92 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 HTR7P1-201ENST00000538670 1336 ntBASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NIPSNAP3BQ9BS92 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms