Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CALR3Q96L12 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.47■□□□□ 0.55
CALR3Q96L12 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CALR3Q96L12 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CALR3Q96L12 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CALR3Q96L12 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CALR3Q96L12 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CALR3Q96L12 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.46■□□□□ 0.55
CALR3Q96L12 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CALR3Q96L12 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.46■□□□□ 0.55
CALR3Q96L12 RNF152P1-201ENST00000397754 604 ntBASIC18.46■□□□□ 0.55
CALR3Q96L12 TSPY5P-201ENST00000426936 936 ntBASIC18.46■□□□□ 0.55
CALR3Q96L12 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.46■□□□□ 0.55
CALR3Q96L12 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.46■□□□□ 0.55
CALR3Q96L12 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.46■□□□□ 0.55
CALR3Q96L12 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 AC012306.2-201ENST00000609350 630 ntBASIC18.46■□□□□ 0.55
CALR3Q96L12 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.46■□□□□ 0.55
CALR3Q96L12 AC010460.3-201ENST00000511359 1579 ntBASIC18.46■□□□□ 0.55
CALR3Q96L12 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CALR3Q96L12 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
CALR3Q96L12 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.46■□□□□ 0.54
CALR3Q96L12 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.45■□□□□ 0.54
CALR3Q96L12 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 PCDHB19P-201ENST00000570871 2371 ntBASIC18.45■□□□□ 0.54
CALR3Q96L12 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CALR3Q96L12 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CALR3Q96L12 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.45■□□□□ 0.54
CALR3Q96L12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.45■□□□□ 0.54
CALR3Q96L12 AC073508.3-201ENST00000619697 1419 ntBASIC18.45■□□□□ 0.54
CALR3Q96L12 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
CALR3Q96L12 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CALR3Q96L12 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.45■□□□□ 0.54
CALR3Q96L12 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.45■□□□□ 0.54
CALR3Q96L12 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
CALR3Q96L12 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CALR3Q96L12 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CALR3Q96L12 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CALR3Q96L12 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.44■□□□□ 0.54
CALR3Q96L12 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CALR3Q96L12 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
CALR3Q96L12 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 SLC25A1P3-201ENST00000395415 828 ntBASIC18.44■□□□□ 0.54
CALR3Q96L12 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.44■□□□□ 0.54
CALR3Q96L12 GUSBP12-201ENST00000513727 720 ntBASIC18.44■□□□□ 0.54
CALR3Q96L12 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CALR3Q96L12 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CALR3Q96L12 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms