Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 AC068418.2-201ENST00000577309 3703 ntBASIC15.4■□□□□ 0.06
AP3S1Q92572 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
AP3S1Q92572 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.4■□□□□ 0.06
AP3S1Q92572 AC083880.1-201ENST00000608266 535 ntBASIC15.4■□□□□ 0.06
AP3S1Q92572 AL353708.3-201ENST00000610272 989 ntBASIC15.4■□□□□ 0.06
AP3S1Q92572 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.4■□□□□ 0.06
AP3S1Q92572 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 KRT16P1-201ENST00000399124 1418 ntBASIC15.4■□□□□ 0.06
AP3S1Q92572 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 LINC00554-201ENST00000564841 3011 ntBASIC15.4■□□□□ 0.06
AP3S1Q92572 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
AP3S1Q92572 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP3S1Q92572 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.4■□□□□ 0.06
AP3S1Q92572 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
AP3S1Q92572 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
AP3S1Q92572 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
AP3S1Q92572 AC239809.2-201ENST00000415381 517 ntBASIC15.39■□□□□ 0.05
AP3S1Q92572 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.39■□□□□ 0.05
AP3S1Q92572 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.39■□□□□ 0.05
AP3S1Q92572 AC008040.2-201ENST00000461049 708 ntBASIC15.39■□□□□ 0.05
AP3S1Q92572 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.39■□□□□ 0.05
AP3S1Q92572 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.39■□□□□ 0.05
AP3S1Q92572 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
AP3S1Q92572 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.39■□□□□ 0.05
AP3S1Q92572 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.39■□□□□ 0.05
AP3S1Q92572 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.39■□□□□ 0.05
AP3S1Q92572 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AP3S1Q92572 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
AP3S1Q92572 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S1Q92572 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
AP3S1Q92572 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.38■□□□□ 0.05
AP3S1Q92572 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.38■□□□□ 0.05
AP3S1Q92572 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
AP3S1Q92572 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms