Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PSMA1-203ENST00000524606 646 ntTSL 26.23□□□□□ -1.413e-7■□□□□ 9.5
LARP4Q71RC2 MRPS18B-208ENST00000472267 1610 ntTSL 1 (best)10.47□□□□□ -0.733e-10■□□□□ 9.5
LARP4Q71RC2 MRPS18B-206ENST00000259873 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.773e-10■□□□□ 9.5
LARP4Q71RC2 MRPS18B-207ENST00000472229 1409 ntTSL 38.62□□□□□ -1.033e-10■□□□□ 9.5
LARP4Q71RC2 ACTN4-208ENST00000497637 877 ntTSL 219.22■□□□□ 0.674e-8■□□□□ 9.5
LARP4Q71RC2 FDXR-208ENST00000578473 2482 ntTSL 1 (best)21.17■□□□□ 0.982e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.842e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.65■□□□□ 0.742e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.61■□□□□ 0.732e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-206ENST00000577509 1912 ntTSL 219.53■□□□□ 0.722e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-209ENST00000579482 2157 ntTSL 219.1■□□□□ 0.652e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-218ENST00000583881 1561 ntTSL 219.06■□□□□ 0.642e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.92■□□□□ 0.622e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.512e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.18■□□□□ 0.52e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.98■□□□□ 0.472e-6■□□□□ 9.5
LARP4Q71RC2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.39■□□□□ 0.372e-6■□□□□ 9.5
LARP4Q71RC2 RPS13-203ENST00000525828 664 ntTSL 215.59■□□□□ 0.093e-12■□□□□ 9.5
LARP4Q71RC2 RPS13-204ENST00000526895 561 ntTSL 313.13□□□□□ -0.313e-12■□□□□ 9.5
LARP4Q71RC2 RPS13-201ENST00000228140 491 ntTSL 2 BASIC9.55□□□□□ -0.883e-12■□□□□ 9.5
LARP4Q71RC2 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.073e-12■□□□□ 9.5
LARP4Q71RC2 SNHG7-202ENST00000416970 789 ntTSL 1 (best)22.3■■□□□ 1.162e-8■□□□□ 9.4
LARP4Q71RC2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.93■■□□□ 1.12e-8■□□□□ 9.4
LARP4Q71RC2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16■□□□□ 0.152e-8■□□□□ 9.4
LARP4Q71RC2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -02e-6■□□□□ 9.4
LARP4Q71RC2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.192e-6■□□□□ 9.4
LARP4Q71RC2 LRP10-204ENST00000551466 2566 ntAPPRIS ALT2 TSL 1 (best)13.64□□□□□ -0.232e-6■□□□□ 9.4
LARP4Q71RC2 PABPC1-216ENST00000520868 971 ntTSL 57.12□□□□□ -1.271e-25■□□□□ 9.4
LARP4Q71RC2 PABPC1-206ENST00000518293 608 ntTSL 35.25□□□□□ -1.571e-25■□□□□ 9.4
LARP4Q71RC2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.954e-6■□□□□ 9.4
LARP4Q71RC2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.57■■□□□ 1.684e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.68■■□□□ 1.544e-6■□□□□ 9.4
LARP4Q71RC2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.44e-6■□□□□ 9.4
LARP4Q71RC2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.334e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.94■■□□□ 1.14e-6■□□□□ 9.4
LARP4Q71RC2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.044e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.044e-6■□□□□ 9.4
LARP4Q71RC2 CLN6-224ENST00000638076 2323 ntTSL 1 (best)21.4■■□□□ 1.024e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-205ENST00000508404 1657 ntTSL 221.37■■□□□ 1.014e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.944e-6■□□□□ 9.4
LARP4Q71RC2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.924e-6■□□□□ 9.4
LARP4Q71RC2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.77■□□□□ 0.924e-6■□□□□ 9.4
LARP4Q71RC2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.7■□□□□ 0.94e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-203ENST00000411549 1944 ntTSL 1 (best)19.98■□□□□ 0.794e-6■□□□□ 9.4
LARP4Q71RC2 LSM6-207ENST00000515311 545 ntTSL 419.88■□□□□ 0.774e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-207ENST00000440176 1328 ntTSL 219.42■□□□□ 0.74e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.15■□□□□ 0.664e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.654e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-206ENST00000423611 877 ntTSL 318.38■□□□□ 0.534e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.524e-6■□□□□ 9.4
LARP4Q71RC2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.21■□□□□ 0.514e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-204ENST00000418880 737 ntTSL 318.19■□□□□ 0.54e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.05■□□□□ 0.484e-6■□□□□ 9.4
LARP4Q71RC2 E2F4-208ENST00000567007 2615 ntTSL 218.04■□□□□ 0.484e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-203ENST00000547808 705 ntTSL 517.31■□□□□ 0.364e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-207ENST00000551020 856 ntTSL 317.31■□□□□ 0.364e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-211ENST00000553007 814 ntTSL 517.31■□□□□ 0.364e-6■□□□□ 9.4
LARP4Q71RC2 AC107871.1-203ENST00000637054 3238 ntTSL 517.04■□□□□ 0.324e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-206ENST00000565736 1568 ntTSL 216.94■□□□□ 0.34e-6■□□□□ 9.4
LARP4Q71RC2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.294e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-210ENST00000552959 1085 ntTSL 316.86■□□□□ 0.294e-6■□□□□ 9.4
LARP4Q71RC2 AC107871.1-201ENST00000637888 2941 ntTSL 516.67■□□□□ 0.264e-6■□□□□ 9.4
LARP4Q71RC2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.224e-6■□□□□ 9.4
LARP4Q71RC2 DANCR-203ENST00000441504 336 ntTSL 216.08■□□□□ 0.164e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-205ENST00000421218 869 ntTSL 516.04■□□□□ 0.164e-6■□□□□ 9.4
LARP4Q71RC2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.094e-6■□□□□ 9.4
LARP4Q71RC2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.44■□□□□ 0.064e-6■□□□□ 9.4
LARP4Q71RC2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.024e-6■□□□□ 9.4
LARP4Q71RC2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -04e-6■□□□□ 9.4
LARP4Q71RC2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.024e-6■□□□□ 9.4
LARP4Q71RC2 ENO2-210ENST00000539713 543 ntTSL 414.82□□□□□ -0.044e-6■□□□□ 9.4
LARP4Q71RC2 EEF1D-222ENST00000528519 553 ntTSL 314.62□□□□□ -0.074e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.58□□□□□ -0.084e-6■□□□□ 9.4
LARP4Q71RC2 ATP5B-205ENST00000548647 682 ntTSL 514.53□□□□□ -0.084e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-208ENST00000447223 915 ntTSL 314.43□□□□□ -0.14e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-216ENST00000480865 1540 ntTSL 514.32□□□□□ -0.124e-6■□□□□ 9.4
LARP4Q71RC2 ENO2-207ENST00000537688 547 ntTSL 514.32□□□□□ -0.124e-6■□□□□ 9.4
LARP4Q71RC2 PSMC3-202ENST00000524447 935 ntTSL 314.1□□□□□ -0.154e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.184e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.8□□□□□ -0.24e-6■□□□□ 9.4
LARP4Q71RC2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.68□□□□□ -0.224e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.234e-6■□□□□ 9.4
LARP4Q71RC2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-6■□□□□ 9.4
LARP4Q71RC2 DNAJC4-205ENST00000536006 693 ntTSL 313.33□□□□□ -0.284e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-219ENST00000600639 285 ntTSL 313.13□□□□□ -0.314e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-218ENST00000600510 1085 ntTSL 212.91□□□□□ -0.344e-6■□□□□ 9.4
LARP4Q71RC2 ENO2-212ENST00000542509 825 ntTSL 512.87□□□□□ -0.354e-6■□□□□ 9.4
LARP4Q71RC2 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC12.64□□□□□ -0.394e-6■□□□□ 9.4
LARP4Q71RC2 FTH1-211ENST00000534719 788 ntTSL 1 (best)12.54□□□□□ -0.46e-19■□□□□ 9.4
LARP4Q71RC2 TMEM165-206ENST00000508561 756 ntTSL 512.26□□□□□ -0.454e-6■□□□□ 9.4
LARP4Q71RC2 ENO2-206ENST00000536199 823 ntTSL 512.22□□□□□ -0.454e-6■□□□□ 9.4
LARP4Q71RC2 DUS1L-216ENST00000584871 676 ntTSL 212.19□□□□□ -0.465e-10■□□□□ 9.4
LARP4Q71RC2 ENO2-208ENST00000537838 541 ntTSL 411.92□□□□□ -0.54e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-214ENST00000469559 4720 ntTSL 211.85□□□□□ -0.514e-6■□□□□ 9.4
LARP4Q71RC2 MPHOSPH6-202ENST00000563100 723 ntTSL 511.84□□□□□ -0.514e-6■□□□□ 9.4
LARP4Q71RC2 DHPS-214ENST00000598246 553 ntTSL 311.8□□□□□ -0.524e-6■□□□□ 9.4
LARP4Q71RC2 ACAA1-211ENST00000452171 927 ntTSL 311.7□□□□□ -0.544e-6■□□□□ 9.4
LARP4Q71RC2 AC107871.1-204ENST00000638026 2895 ntTSL 1 (best)11.6□□□□□ -0.554e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.564e-6■□□□□ 9.4
LARP4Q71RC2 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.564e-6■□□□□ 9.4
Retrieved 100 of 15,922 protein–RNA pairs in 221.5 ms