RNA–Protein interactions for RNA: ENST00000480865.5

ACAA1-216, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5

Gene ACAA1, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-216ENST00000480865 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
ACAA1-216ENST00000480865 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
ACAA1-216ENST00000480865 ABCC9O60706 1549 aa31.06■■■□□ 2.56
ACAA1-216ENST00000480865 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
ACAA1-216ENST00000480865 NACADO15069 1562 aa30.15■■■□□ 2.42
ACAA1-216ENST00000480865 DCAF1Q9Y4B6 1507 aa30.14■■■□□ 2.42
ACAA1-216ENST00000480865 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
ACAA1-216ENST00000480865 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
ACAA1-216ENST00000480865 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
ACAA1-216ENST00000480865 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
ACAA1-216ENST00000480865 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
ACAA1-216ENST00000480865 BICRAQ9NZM4 1560 aa29.19■■■□□ 2.26
ACAA1-216ENST00000480865 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.241e-7■□□□□ 9.6
ACAA1-216ENST00000480865 SHROOM4Q9ULL8 1493 aa28.92■■■□□ 2.22
ACAA1-216ENST00000480865 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
ACAA1-216ENST00000480865 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
ACAA1-216ENST00000480865 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
ACAA1-216ENST00000480865 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
ACAA1-216ENST00000480865 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
ACAA1-216ENST00000480865 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
ACAA1-216ENST00000480865 MROH2BQ7Z745 1585 aa28.04■■■□□ 2.08
ACAA1-216ENST00000480865 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
ACAA1-216ENST00000480865 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
ACAA1-216ENST00000480865 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
ACAA1-216ENST00000480865 RSF1Q96T23 1441 aaPredicted RBP27.85■■■□□ 2.05
ACAA1-216ENST00000480865 NCAPD3P42695 1498 aa27.8■■■□□ 2.04
ACAA1-216ENST00000480865 WIZO95785 1651 aa27.79■■■□□ 2.04
ACAA1-216ENST00000480865 HMGXB3Q12766 1538 aa27.74■■■□□ 2.03
ACAA1-216ENST00000480865 BAZ1BQ9UIG0 1483 aaKnown RBP27.67■■■□□ 2.02
ACAA1-216ENST00000480865 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
ACAA1-216ENST00000480865 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
ACAA1-216ENST00000480865 CCDC88BA6NC98 1476 aa27.14■■□□□ 1.94
ACAA1-216ENST00000480865 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
ACAA1-216ENST00000480865 NESP48681 1621 aa27.01■■□□□ 1.91
ACAA1-216ENST00000480865 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
ACAA1-216ENST00000480865 CFTRP13569 1480 aa26.94■■□□□ 1.9
ACAA1-216ENST00000480865 PRDM2Q13029 1718 aa26.86■■□□□ 1.89
ACAA1-216ENST00000480865 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
ACAA1-216ENST00000480865 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
ACAA1-216ENST00000480865 ERCC6Q03468 1493 aa26.73■■□□□ 1.87
ACAA1-216ENST00000480865 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.86
ACAA1-216ENST00000480865 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.85
ACAA1-216ENST00000480865 THOC2Q8NI27 1593 aaKnown RBP26.57■■□□□ 1.84
ACAA1-216ENST00000480865 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
ACAA1-216ENST00000480865 WDR62O43379 1518 aa26.44■■□□□ 1.82
ACAA1-216ENST00000480865 URB2Q14146 1524 aaKnown RBP26.42■■□□□ 1.82
ACAA1-216ENST00000480865 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
ACAA1-216ENST00000480865 CUX2O14529 1486 aa26.34■■□□□ 1.81
ACAA1-216ENST00000480865 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
ACAA1-216ENST00000480865 TOPBP1Q92547 1522 aa26.33■■□□□ 1.81
ACAA1-216ENST00000480865 CUX1P39880 1505 aa26.29■■□□□ 1.8
ACAA1-216ENST00000480865 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
ACAA1-216ENST00000480865 SYNJ1O43426 1573 aa26.21■■□□□ 1.79
ACAA1-216ENST00000480865 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
ACAA1-216ENST00000480865 TOP2BQ02880 1626 aa26.19■■□□□ 1.78
ACAA1-216ENST00000480865 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
ACAA1-216ENST00000480865 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
ACAA1-216ENST00000480865 IFT140Q96RY7 1462 aa26.05■■□□□ 1.76
ACAA1-216ENST00000480865 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
ACAA1-216ENST00000480865 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
ACAA1-216ENST00000480865 SOGA1O94964 1423 aa25.99■■□□□ 1.75
ACAA1-216ENST00000480865 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
ACAA1-216ENST00000480865 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
ACAA1-216ENST00000480865 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
ACAA1-216ENST00000480865 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
ACAA1-216ENST00000480865 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
ACAA1-216ENST00000480865 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
ACAA1-216ENST00000480865 ABCA5Q8WWZ7 1642 aa25.8■■□□□ 1.72
ACAA1-216ENST00000480865 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
ACAA1-216ENST00000480865 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.722e-7■■■■□ 23
ACAA1-216ENST00000480865 GAPVD1Q14C86 1478 aa25.72■■□□□ 1.71
ACAA1-216ENST00000480865 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
ACAA1-216ENST00000480865 GRIN2BQ13224 1484 aa25.66■■□□□ 1.7
ACAA1-216ENST00000480865 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
ACAA1-216ENST00000480865 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
ACAA1-216ENST00000480865 SNAPC4Q5SXM2 1469 aa25.58■■□□□ 1.69
ACAA1-216ENST00000480865 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
ACAA1-216ENST00000480865 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
ACAA1-216ENST00000480865 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
ACAA1-216ENST00000480865 IGF1RP08069 1367 aa25.48■■□□□ 1.67
ACAA1-216ENST00000480865 CUL7Q14999 1698 aa25.48■■□□□ 1.67
ACAA1-216ENST00000480865 CHD1O14646 1710 aa25.47■■□□□ 1.67
ACAA1-216ENST00000480865 SYNJ2O15056 1496 aa25.46■■□□□ 1.67
ACAA1-216ENST00000480865 EEA1Q15075 1411 aa25.44■■□□□ 1.66
ACAA1-216ENST00000480865 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
ACAA1-216ENST00000480865 GRIN2AQ12879 1464 aa25.35■■□□□ 1.65
ACAA1-216ENST00000480865 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
ACAA1-216ENST00000480865 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
ACAA1-216ENST00000480865 FBLN2P98095 1184 aa25.34■■□□□ 1.65
ACAA1-216ENST00000480865 CSRNP3Q8WYN3 585 aa25.3■■□□□ 1.64
ACAA1-216ENST00000480865 PRXQ9BXM0 1461 aa25.29■■□□□ 1.64
ACAA1-216ENST00000480865 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
ACAA1-216ENST00000480865 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
ACAA1-216ENST00000480865 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
ACAA1-216ENST00000480865 CEP170Q5SW79 1584 aa25.23■■□□□ 1.63
ACAA1-216ENST00000480865 NUP160Q12769 1436 aa25.22■■□□□ 1.63
ACAA1-216ENST00000480865 KIF21BO75037 1637 aa25.2■■□□□ 1.62
ACAA1-216ENST00000480865 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
ACAA1-216ENST00000480865 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
ACAA1-216ENST00000480865 KIAA0586Q9BVV6 1533 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms