RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
PABPC1-206ENST00000518293 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
PABPC1-206ENST00000518293 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
PABPC1-206ENST00000518293 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
PABPC1-206ENST00000518293 FOXD1Q16676 465 aa18.42■□□□□ 0.54
PABPC1-206ENST00000518293 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
PABPC1-206ENST00000518293 MSH5O43196 834 aa17.27■□□□□ 0.36
PABPC1-206ENST00000518293 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
PABPC1-206ENST00000518293 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
PABPC1-206ENST00000518293 ADRA2BP18089 450 aa17.21■□□□□ 0.35
PABPC1-206ENST00000518293 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
PABPC1-206ENST00000518293 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
PABPC1-206ENST00000518293 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-206ENST00000518293 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
PABPC1-206ENST00000518293 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
PABPC1-206ENST00000518293 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
PABPC1-206ENST00000518293 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-206ENST00000518293 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
PABPC1-206ENST00000518293 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
PABPC1-206ENST00000518293 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
PABPC1-206ENST00000518293 CACNB1Q02641 598 aaPredicted RBP14.8□□□□□ -0.04
PABPC1-206ENST00000518293 RNF39Q9H2S5 420 aa14.7□□□□□ -0.06
PABPC1-206ENST00000518293 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
PABPC1-206ENST00000518293 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
PABPC1-206ENST00000518293 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
PABPC1-206ENST00000518293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
PABPC1-206ENST00000518293 KCNA4P22459 653 aa14.44□□□□□ -0.1
PABPC1-206ENST00000518293 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
PABPC1-206ENST00000518293 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
PABPC1-206ENST00000518293 CAPN15O75808 1086 aa13.93□□□□□ -0.18
PABPC1-206ENST00000518293 SPINK5Q9NQ38 1064 aaPredicted RBP13.9□□□□□ -0.18
PABPC1-206ENST00000518293 APLP2Q06481 763 aa13.82□□□□□ -0.2
PABPC1-206ENST00000518293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
PABPC1-206ENST00000518293 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
PABPC1-206ENST00000518293 DSG3P32926 999 aa13.78□□□□□ -0.2
PABPC1-206ENST00000518293 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-206ENST00000518293 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-206ENST00000518293 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-206ENST00000518293 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
PABPC1-206ENST00000518293 MYCNP04198 464 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-206ENST00000518293 ABCB7O75027 752 aa13.59□□□□□ -0.23
PABPC1-206ENST00000518293 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
PABPC1-206ENST00000518293 POLA2Q14181 598 aa13.33□□□□□ -0.28
PABPC1-206ENST00000518293 ZBTB22O15209 634 aa13.24□□□□□ -0.29
PABPC1-206ENST00000518293 ATF5Q9Y2D1 282 aaPredicted RBP13.24□□□□□ -0.29
PABPC1-206ENST00000518293 POTEHQ6S545 545 aa13.23□□□□□ -0.29
PABPC1-206ENST00000518293 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
PABPC1-206ENST00000518293 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
PABPC1-206ENST00000518293 ATXN8OSP0DMR3 200 aa13.07□□□□□ -0.32
PABPC1-206ENST00000518293 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
PABPC1-206ENST00000518293 OSCARQ8IYS5 282 aa12.9□□□□□ -0.34
PABPC1-206ENST00000518293 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
PABPC1-206ENST00000518293 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
PABPC1-206ENST00000518293 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
PABPC1-206ENST00000518293 FBLN2P98095 1184 aa12.81□□□□□ -0.36
PABPC1-206ENST00000518293 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-206ENST00000518293 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
PABPC1-206ENST00000518293 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
PABPC1-206ENST00000518293 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
PABPC1-206ENST00000518293 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-206ENST00000518293 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
PABPC1-206ENST00000518293 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
PABPC1-206ENST00000518293 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
PABPC1-206ENST00000518293 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
PABPC1-206ENST00000518293 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
PABPC1-206ENST00000518293 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-206ENST00000518293 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
PABPC1-206ENST00000518293 HAX1O00165 279 aa12.36□□□□□ -0.43
PABPC1-206ENST00000518293 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
PABPC1-206ENST00000518293 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
PABPC1-206ENST00000518293 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
PABPC1-206ENST00000518293 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
PABPC1-206ENST00000518293 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
PABPC1-206ENST00000518293 EVX2Q03828 476 aa12.13□□□□□ -0.47
PABPC1-206ENST00000518293 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
PABPC1-206ENST00000518293 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
PABPC1-206ENST00000518293 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
PABPC1-206ENST00000518293 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-206ENST00000518293 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
PABPC1-206ENST00000518293 GABBR2O75899 941 aa11.9□□□□□ -0.5
PABPC1-206ENST00000518293 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
PABPC1-206ENST00000518293 CLCN6P51797 869 aa11.78□□□□□ -0.52
PABPC1-206ENST00000518293 PROM2Q8N271 834 aa11.77□□□□□ -0.53
PABPC1-206ENST00000518293 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
PABPC1-206ENST00000518293 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
PABPC1-206ENST00000518293 PAK3O75914 559 aaPredicted RBP11.73□□□□□ -0.53
PABPC1-206ENST00000518293 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
PABPC1-206ENST00000518293 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-206ENST00000518293 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
PABPC1-206ENST00000518293 FKBP8Q14318 412 aa11.62□□□□□ -0.55
PABPC1-206ENST00000518293 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
PABPC1-206ENST00000518293 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
PABPC1-206ENST00000518293 LHX8Q68G74 356 aa11.59□□□□□ -0.55
PABPC1-206ENST00000518293 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
PABPC1-206ENST00000518293 MIER1Q8N108 512 aa11.58□□□□□ -0.56
PABPC1-206ENST00000518293 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
PABPC1-206ENST00000518293 TSPYL2Q9H2G4 693 aaPredicted RBP11.51□□□□□ -0.57
PABPC1-206ENST00000518293 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
PABPC1-206ENST00000518293 MS4A3Q96HJ5 214 aa11.43□□□□□ -0.58
PABPC1-206ENST00000518293 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms