RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 AEBP2Q6ZN18 517 aaPredicted RBP30.68■■■□□ 2.5
PABPC1-216ENST00000520868 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
PABPC1-216ENST00000520868 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
PABPC1-216ENST00000520868 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
PABPC1-216ENST00000520868 FOXD1Q16676 465 aa24.25■■□□□ 1.47
PABPC1-216ENST00000520868 PLPPR3Q6T4P5 718 aa23.65■■□□□ 1.38
PABPC1-216ENST00000520868 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
PABPC1-216ENST00000520868 ADRA2BP18089 450 aa23■■□□□ 1.27
PABPC1-216ENST00000520868 PIAS4Q8N2W9 510 aaPredicted RBP22.72■■□□□ 1.23
PABPC1-216ENST00000520868 MSH5O43196 834 aa22.36■■□□□ 1.17
PABPC1-216ENST00000520868 POTEDQ86YR6 584 aa22.26■■□□□ 1.15
PABPC1-216ENST00000520868 MAPK8IP2Q13387 824 aaPredicted RBP21.02■□□□□ 0.96
PABPC1-216ENST00000520868 PPP4R3CPQ6ZMV5 832 aa20.87■□□□□ 0.93
PABPC1-216ENST00000520868 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
PABPC1-216ENST00000520868 DMRT2Q9Y5R5 561 aa20.68■□□□□ 0.9
PABPC1-216ENST00000520868 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
PABPC1-216ENST00000520868 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
PABPC1-216ENST00000520868 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
PABPC1-216ENST00000520868 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
PABPC1-216ENST00000520868 KCNA4P22459 653 aa19.97■□□□□ 0.79
PABPC1-216ENST00000520868 NPM3O75607 178 aaKnown RBP19.92■□□□□ 0.78
PABPC1-216ENST00000520868 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
PABPC1-216ENST00000520868 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
PABPC1-216ENST00000520868 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
PABPC1-216ENST00000520868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
PABPC1-216ENST00000520868 CACNB1Q02641 598 aaPredicted RBP19.01■□□□□ 0.63
PABPC1-216ENST00000520868 SLC4A2P04920 1241 aa18.95■□□□□ 0.62
PABPC1-216ENST00000520868 C1QBPQ07021 282 aaKnown RBP18.88■□□□□ 0.61
PABPC1-216ENST00000520868 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
PABPC1-216ENST00000520868 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
PABPC1-216ENST00000520868 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
PABPC1-216ENST00000520868 ZBTB22O15209 634 aa18.41■□□□□ 0.54
PABPC1-216ENST00000520868 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
PABPC1-216ENST00000520868 CAPN15O75808 1086 aa18.35■□□□□ 0.53
PABPC1-216ENST00000520868 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
PABPC1-216ENST00000520868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
PABPC1-216ENST00000520868 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
PABPC1-216ENST00000520868 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
PABPC1-216ENST00000520868 TRHP20396 242 aaPredicted RBP18.19■□□□□ 0.5
PABPC1-216ENST00000520868 DSG3P32926 999 aa18.16■□□□□ 0.5
PABPC1-216ENST00000520868 APLP2Q06481 763 aa18.13■□□□□ 0.49
PABPC1-216ENST00000520868 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
PABPC1-216ENST00000520868 ABCB7O75027 752 aa18.04■□□□□ 0.48
PABPC1-216ENST00000520868 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-216ENST00000520868 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
PABPC1-216ENST00000520868 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
PABPC1-216ENST00000520868 POLA2Q14181 598 aa17.78■□□□□ 0.44
PABPC1-216ENST00000520868 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
PABPC1-216ENST00000520868 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
PABPC1-216ENST00000520868 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
PABPC1-216ENST00000520868 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
PABPC1-216ENST00000520868 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
PABPC1-216ENST00000520868 FBLN2P98095 1184 aa17.12■□□□□ 0.33
PABPC1-216ENST00000520868 POTEHQ6S545 545 aa17.1■□□□□ 0.33
PABPC1-216ENST00000520868 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
PABPC1-216ENST00000520868 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
PABPC1-216ENST00000520868 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
PABPC1-216ENST00000520868 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
PABPC1-216ENST00000520868 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-216ENST00000520868 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-216ENST00000520868 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
PABPC1-216ENST00000520868 SSUH2Q9Y2M2 353 aa16.74■□□□□ 0.27
PABPC1-216ENST00000520868 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
PABPC1-216ENST00000520868 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PABPC1-216ENST00000520868 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
PABPC1-216ENST00000520868 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
PABPC1-216ENST00000520868 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
PABPC1-216ENST00000520868 SPDYE1Q8NFV5 336 aaPredicted RBP16.47■□□□□ 0.23
PABPC1-216ENST00000520868 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
PABPC1-216ENST00000520868 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
PABPC1-216ENST00000520868 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
PABPC1-216ENST00000520868 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
PABPC1-216ENST00000520868 FKBP8Q14318 412 aa16.19■□□□□ 0.18
PABPC1-216ENST00000520868 PROM2Q8N271 834 aa16.18■□□□□ 0.18
PABPC1-216ENST00000520868 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
PABPC1-216ENST00000520868 HAX1O00165 279 aa16.03■□□□□ 0.16
PABPC1-216ENST00000520868 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
PABPC1-216ENST00000520868 EVX2Q03828 476 aa15.99■□□□□ 0.15
PABPC1-216ENST00000520868 FARP1Q9Y4F1 1045 aaPredicted RBP15.93■□□□□ 0.14
PABPC1-216ENST00000520868 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
PABPC1-216ENST00000520868 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
PABPC1-216ENST00000520868 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-216ENST00000520868 CD44P16070 742 aaKnown RBP15.73■□□□□ 0.11
PABPC1-216ENST00000520868 MIER1Q8N108 512 aa15.71■□□□□ 0.11
PABPC1-216ENST00000520868 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
PABPC1-216ENST00000520868 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
PABPC1-216ENST00000520868 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
PABPC1-216ENST00000520868 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
PABPC1-216ENST00000520868 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
PABPC1-216ENST00000520868 GABBR2O75899 941 aa15.55■□□□□ 0.08
PABPC1-216ENST00000520868 VASPP50552 380 aaPredicted RBP15.49■□□□□ 0.07
PABPC1-216ENST00000520868 ZNF579Q8NAF0 562 aaKnown RBP15.48■□□□□ 0.07
PABPC1-216ENST00000520868 PHF12Q96QT6 1004 aa15.47■□□□□ 0.07
PABPC1-216ENST00000520868 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
PABPC1-216ENST00000520868 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
PABPC1-216ENST00000520868 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
PABPC1-216ENST00000520868 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
PABPC1-216ENST00000520868 NUBP1P53384 320 aa15.39■□□□□ 0.05
PABPC1-216ENST00000520868 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-216ENST00000520868 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms