Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA6AP0CW24 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PNMA6AP0CW24 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 AL645929.1-201ENST00000420084 975 ntBASIC19.1■□□□□ 0.65
PNMA6AP0CW24 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.1■□□□□ 0.65
PNMA6AP0CW24 MTCL1P1-201ENST00000446207 792 ntBASIC19.1■□□□□ 0.65
PNMA6AP0CW24 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.1■□□□□ 0.65
PNMA6AP0CW24 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 OR6D1P-202ENST00000641007 5290 ntBASIC19.1■□□□□ 0.65
PNMA6AP0CW24 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PNMA6AP0CW24 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PNMA6AP0CW24 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PNMA6AP0CW24 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.08■□□□□ 0.64
PNMA6AP0CW24 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PNMA6AP0CW24 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PNMA6AP0CW24 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms