Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGN1P05114 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGN1P05114 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGN1P05114 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HMGN1P05114 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGN1P05114 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.83■□□□□ 0.13
HMGN1P05114 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
HMGN1P05114 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
HMGN1P05114 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGN1P05114 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGN1P05114 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGN1P05114 AC096633.1-201ENST00000422446 749 ntBASIC15.83■□□□□ 0.12
HMGN1P05114 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGN1P05114 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGN1P05114 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGN1P05114 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGN1P05114 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGN1P05114 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGN1P05114 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
HMGN1P05114 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
HMGN1P05114 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HMGN1P05114 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGN1P05114 FAM8A6P-201ENST00000407496 1135 ntBASIC15.82■□□□□ 0.12
HMGN1P05114 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 AL031432.5-201ENST00000641059 760 ntBASIC15.82■□□□□ 0.12
HMGN1P05114 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 KRT18P22-201ENST00000402024 1347 ntBASIC15.82■□□□□ 0.12
HMGN1P05114 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 LINC01568-207ENST00000641790 1380 ntBASIC15.82■□□□□ 0.12
HMGN1P05114 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGN1P05114 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
HMGN1P05114 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.82■□□□□ 0.12
HMGN1P05114 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGN1P05114 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HMGN1P05114 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMGN1P05114 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGN1P05114 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HMGN1P05114 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGN1P05114 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGN1P05114 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.81■□□□□ 0.12
HMGN1P05114 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms