Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 AL023803.3-201ENST00000615559 522 ntBASIC14.83□□□□□ -0.04
CD3DP04234 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.83□□□□□ -0.04
CD3DP04234 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.83□□□□□ -0.04
CD3DP04234 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.83□□□□□ -0.04
CD3DP04234 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CD3DP04234 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
CD3DP04234 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD3DP04234 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 BX276092.7-203ENST00000637198 1536 ntBASIC14.82□□□□□ -0.04
CD3DP04234 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.82□□□□□ -0.04
CD3DP04234 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.82□□□□□ -0.04
CD3DP04234 AL353719.1-201ENST00000566847 864 ntBASIC14.82□□□□□ -0.04
CD3DP04234 AC006058.3-201ENST00000606217 1069 ntBASIC14.82□□□□□ -0.04
CD3DP04234 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.82□□□□□ -0.04
CD3DP04234 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 AL513523.2-202ENST00000427283 2040 ntBASIC14.82□□□□□ -0.04
CD3DP04234 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD3DP04234 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.82□□□□□ -0.04
CD3DP04234 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD3DP04234 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.81□□□□□ -0.04
CD3DP04234 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 AC093525.9-201ENST00000624961 1746 ntBASIC14.81□□□□□ -0.04
CD3DP04234 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CD3DP04234 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CD3DP04234 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.81□□□□□ -0.04
CD3DP04234 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.81□□□□□ -0.04
CD3DP04234 NUDT16P1-203ENST00000513809 620 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms