Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
IFNA1P01562 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.84□□□□□ -0.19
IFNA1P01562 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 AF201337.1-201ENST00000520239 748 ntBASIC13.84□□□□□ -0.19
IFNA1P01562 AC105036.2-201ENST00000569468 176 ntBASIC13.84□□□□□ -0.19
IFNA1P01562 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.84□□□□□ -0.19
IFNA1P01562 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
IFNA1P01562 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 AC116353.5-201ENST00000638148 1699 ntBASIC13.84□□□□□ -0.19
IFNA1P01562 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.84□□□□□ -0.19
IFNA1P01562 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
IFNA1P01562 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IFNA1P01562 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.83□□□□□ -0.19
IFNA1P01562 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
IFNA1P01562 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
IFNA1P01562 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
IFNA1P01562 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
IFNA1P01562 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
IFNA1P01562 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
IFNA1P01562 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 HACD1-201ENST00000326961 773 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.83□□□□□ -0.2
IFNA1P01562 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.83□□□□□ -0.2
IFNA1P01562 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
IFNA1P01562 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.83□□□□□ -0.2
IFNA1P01562 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.83□□□□□ -0.2
IFNA1P01562 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.83□□□□□ -0.2
IFNA1P01562 LINC00554-201ENST00000564841 3011 ntBASIC13.83□□□□□ -0.2
IFNA1P01562 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.83□□□□□ -0.2
IFNA1P01562 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.83□□□□□ -0.2
IFNA1P01562 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
IFNA1P01562 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
IFNA1P01562 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms