Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 AL355312.1-201ENST00000407115 2176 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 TSPY14P-201ENST00000303979 915 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 AC098590.1-201ENST00000468126 897 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 AC113404.2-201ENST00000507884 177 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 LINC01451-201ENST00000623792 534 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF253O75346 HLA-J-201ENST00000462773 1622 ntBASIC13.64□□□□□ -0.23
ZNF253O75346 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF253O75346 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF253O75346 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF253O75346 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 MIR718-201ENST00000390190 70 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF253O75346 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF253O75346 AL158047.1-201ENST00000445918 881 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 SEC1P-202ENST00000473944 940 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 AC128688.1-201ENST00000487626 519 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.63□□□□□ -0.23
ZNF253O75346 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF253O75346 EGLN1P1-201ENST00000531623 762 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.63□□□□□ -0.23
ZNF253O75346 NEK4P2-201ENST00000580004 1012 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
ZNF253O75346 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 AC092865.7-201ENST00000641832 219 ntBASIC13.63□□□□□ -0.23
ZNF253O75346 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF253O75346 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZNF253O75346 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ZNF253O75346 LINC00554-201ENST00000564841 3011 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms