Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
IDH3BO43837 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
IDH3BO43837 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
IDH3BO43837 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
IDH3BO43837 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IDH3BO43837 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IDH3BO43837 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IDH3BO43837 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.08■□□□□ 0.17
IDH3BO43837 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IDH3BO43837 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 C8orf49-201ENST00000525043 1968 ntBASIC16.08■□□□□ 0.16
IDH3BO43837 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 LINC00602-201ENST00000629776 2065 ntBASIC16.08■□□□□ 0.16
IDH3BO43837 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.08■□□□□ 0.16
IDH3BO43837 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IDH3BO43837 KRT18P65-201ENST00000439811 1286 ntBASIC16.08■□□□□ 0.16
IDH3BO43837 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.08■□□□□ 0.16
IDH3BO43837 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.08■□□□□ 0.16
IDH3BO43837 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IDH3BO43837 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 KRT18P22-201ENST00000402024 1347 ntBASIC16.08■□□□□ 0.16
IDH3BO43837 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
IDH3BO43837 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
IDH3BO43837 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IDH3BO43837 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IDH3BO43837 HLA-J-201ENST00000462773 1622 ntBASIC16.08■□□□□ 0.16
IDH3BO43837 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IDH3BO43837 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IDH3BO43837 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 DDX43P3-201ENST00000441064 443 ntBASIC16.07■□□□□ 0.16
IDH3BO43837 TSPY15P-201ENST00000457163 923 ntBASIC16.07■□□□□ 0.16
IDH3BO43837 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.07■□□□□ 0.16
IDH3BO43837 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IDH3BO43837 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IDH3BO43837 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.06■□□□□ 0.16
IDH3BO43837 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.06■□□□□ 0.16
IDH3BO43837 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms