Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 AC005593.1-201ENST00000624894 515 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 PGM5P2-202ENST00000637225 1043 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX27Q96L92 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 AL135999.2-201ENST00000622438 1686 ntBASIC18.81■□□□□ 0.6
SNX27Q96L92 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX27Q96L92 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX27Q96L92 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX27Q96L92 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 LYSMD4-203ENST00000378904 2122 ntBASIC18.8■□□□□ 0.6
SNX27Q96L92 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX27Q96L92 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX27Q96L92 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 ACTG1P4-201ENST00000425123 1122 ntBASIC18.8■□□□□ 0.6
SNX27Q96L92 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX27Q96L92 AC009947.1-201ENST00000444350 727 ntBASIC18.8■□□□□ 0.6
SNX27Q96L92 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX27Q96L92 RFPL4AP1-201ENST00000530883 850 ntBASIC18.8■□□□□ 0.6
SNX27Q96L92 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX27Q96L92 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX27Q96L92 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX27Q96L92 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX27Q96L92 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX27Q96L92 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX27Q96L92 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX27Q96L92 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX27Q96L92 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX27Q96L92 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 GK-202ENST00000378941 458 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX27Q96L92 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNX27Q96L92 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX27Q96L92 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX27Q96L92 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX27Q96L92 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX27Q96L92 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.79■□□□□ 0.6
SNX27Q96L92 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX27Q96L92 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX27Q96L92 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX27Q96L92 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SNX27Q96L92 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.78■□□□□ 0.6
SNX27Q96L92 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX27Q96L92 AC010327.4-202ENST00000591484 748 ntBASIC18.78■□□□□ 0.6
SNX27Q96L92 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.78■□□□□ 0.6
SNX27Q96L92 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SNX27Q96L92 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX27Q96L92 GPR89P-201ENST00000407924 1495 ntBASIC18.77■□□□□ 0.6
SNX27Q96L92 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX27Q96L92 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX27Q96L92 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SNX27Q96L92 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX27Q96L92 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms