Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BEST2Q8NFU1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 MIR574-201ENST00000385209 96 ntBASIC18.77■□□□□ 0.6
BEST2Q8NFU1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 AC004706.3-202ENST00000621574 984 ntBASIC18.77■□□□□ 0.6
BEST2Q8NFU1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 GNAS-203ENST00000306120 1878 ntBASIC18.77■□□□□ 0.6
BEST2Q8NFU1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BEST2Q8NFU1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
BEST2Q8NFU1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
BEST2Q8NFU1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 PMS2P1-201ENST00000431037 1228 ntBASIC18.76■□□□□ 0.59
BEST2Q8NFU1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 AC106730.1-201ENST00000566722 1090 ntBASIC18.76■□□□□ 0.59
BEST2Q8NFU1 MIR1199-201ENST00000621445 119 ntBASIC18.76■□□□□ 0.59
BEST2Q8NFU1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 AC134043.2-201ENST00000624206 2238 ntBASIC18.76■□□□□ 0.59
BEST2Q8NFU1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BEST2Q8NFU1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 KRT18P27-201ENST00000427733 1299 ntBASIC18.75■□□□□ 0.59
BEST2Q8NFU1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 AC023511.2-201ENST00000618803 211 ntBASIC18.75■□□□□ 0.59
BEST2Q8NFU1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 AP002414.3-201ENST00000589352 1468 ntBASIC18.75■□□□□ 0.59
BEST2Q8NFU1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BEST2Q8NFU1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 LYSMD4-203ENST00000378904 2122 ntBASIC18.74■□□□□ 0.59
BEST2Q8NFU1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BEST2Q8NFU1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms