Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 LYSMD4-203ENST00000378904 2122 ntBASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SWSAP1Q6NVH7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 AC108751.1-201ENST00000490852 363 ntBASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 RPS15P9-201ENST00000494093 319 ntBASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 PMS2P7-201ENST00000506558 1336 ntBASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SWSAP1Q6NVH7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 AC133963.1-201ENST00000504166 1679 ntBASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 AC134043.2-201ENST00000624206 2238 ntBASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SWSAP1Q6NVH7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SWSAP1Q6NVH7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SWSAP1Q6NVH7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 MED15P5-201ENST00000423150 992 ntBASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 ACTG1P4-201ENST00000425123 1122 ntBASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 AC007967.2-201ENST00000432613 625 ntBASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 FAM197Y3-203ENST00000618346 717 ntBASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 GPR89P-201ENST00000407924 1495 ntBASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SWSAP1Q6NVH7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SWSAP1Q6NVH7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms