Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SIX6O95475 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SIX6O95475 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.67□□□□□ -0.06
SIX6O95475 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SIX6O95475 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
SIX6O95475 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SIX6O95475 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SIX6O95475 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 AC004980.1-204ENST00000429707 299 ntBASIC14.66□□□□□ -0.06
SIX6O95475 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.66□□□□□ -0.06
SIX6O95475 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SIX6O95475 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SIX6O95475 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SIX6O95475 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SIX6O95475 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.65□□□□□ -0.06
SIX6O95475 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SIX6O95475 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SIX6O95475 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
SIX6O95475 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.65□□□□□ -0.06
SIX6O95475 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.65□□□□□ -0.06
SIX6O95475 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.65□□□□□ -0.06
SIX6O95475 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.65□□□□□ -0.06
SIX6O95475 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.65□□□□□ -0.06
SIX6O95475 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SIX6O95475 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.65□□□□□ -0.07
SIX6O95475 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SIX6O95475 AC036111.1-201ENST00000533973 1582 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms