Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 UPK3BP1-201ENST00000428678 509 ntBASIC18.07■□□□□ 0.48
PCDH9Q9HC56 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 AC002558.1-201ENST00000488906 803 ntBASIC18.07■□□□□ 0.48
PCDH9Q9HC56 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 AP002383.4-201ENST00000442518 975 ntBASIC18.06■□□□□ 0.48
PCDH9Q9HC56 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 AC093458.2-201ENST00000623150 629 ntBASIC18.06■□□□□ 0.48
PCDH9Q9HC56 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDH9Q9HC56 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AC124067.4-201ENST00000519691 2379 ntBASIC18.05■□□□□ 0.48
PCDH9Q9HC56 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AC011840.4-201ENST00000578471 627 ntBASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AP002414.4-201ENST00000589764 1148 ntBASIC18.05■□□□□ 0.48
PCDH9Q9HC56 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDH9Q9HC56 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 AL845331.1-201ENST00000424978 1190 ntBASIC18.04■□□□□ 0.48
PCDH9Q9HC56 DRAXINP1-201ENST00000437611 948 ntBASIC18.04■□□□□ 0.48
PCDH9Q9HC56 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDH9Q9HC56 AL353801.3-201ENST00000609898 542 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms