Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
SSBP4Q9BWG4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP4Q9BWG4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 AC026691.1-201ENST00000602502 2017 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 AC100803.2-201ENST00000562459 1963 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 LINC00304-203ENST00000565008 1864 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 MESTP1-201ENST00000404287 994 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 RNA5SP413-201ENST00000516373 109 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 AC005915.1-201ENST00000624912 2018 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 PAUPAR-201ENST00000630360 2965 ntBASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSBP4Q9BWG4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms