Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 MRPL20P1-201ENST00000400819 433 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AC018845.2-201ENST00000568326 409 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AC005829.1-201ENST00000570002 483 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AL353135.1-201ENST00000606729 504 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AC090164.3-201ENST00000610780 2143 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 KRT18P55-202ENST00000578578 1546 ntBASIC17.51■□□□□ 0.39
SIPA1Q96FS4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SIPA1Q96FS4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 PTCHD3P3-201ENST00000403073 906 ntBASIC17.5■□□□□ 0.39
SIPA1Q96FS4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 AC010654.1-201ENST00000615722 808 ntBASIC17.5■□□□□ 0.39
SIPA1Q96FS4 GGTLC5P-201ENST00000617623 998 ntBASIC17.5■□□□□ 0.39
SIPA1Q96FS4 AC092865.6-201ENST00000642101 219 ntBASIC17.5■□□□□ 0.39
SIPA1Q96FS4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIPA1Q96FS4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 FZD10-202ENST00000539839 3282 ntBASIC17.49■□□□□ 0.39
SIPA1Q96FS4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 FLJ13224-201ENST00000313737 1514 ntBASIC17.49■□□□□ 0.39
SIPA1Q96FS4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 AP002414.1-201ENST00000391405 1147 ntBASIC17.49■□□□□ 0.39
SIPA1Q96FS4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 DNAJB3-202ENST00000449667 1266 ntBASIC17.49■□□□□ 0.39
SIPA1Q96FS4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SIPA1Q96FS4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms