Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 KLF4P1-201ENST00000412782 1185 ntBASIC18.79■□□□□ 0.6
SEMA4DQ92854 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 AL121772.3-201ENST00000610840 674 ntBASIC18.79■□□□□ 0.6
SEMA4DQ92854 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 AP005117.1-201ENST00000584346 1413 ntBASIC18.79■□□□□ 0.6
SEMA4DQ92854 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA4DQ92854 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA4DQ92854 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 AC003669.1-201ENST00000334569 611 ntBASIC18.78■□□□□ 0.6
SEMA4DQ92854 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 UNC93B7-201ENST00000509439 705 ntBASIC18.78■□□□□ 0.6
SEMA4DQ92854 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 AC091304.2-201ENST00000564639 760 ntBASIC18.78■□□□□ 0.6
SEMA4DQ92854 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 AL135999.2-201ENST00000622438 1686 ntBASIC18.78■□□□□ 0.6
SEMA4DQ92854 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA4DQ92854 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA4DQ92854 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 AC004817.3-201ENST00000602957 2129 ntBASIC18.77■□□□□ 0.6
SEMA4DQ92854 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 AKR1C7P-201ENST00000305623 895 ntBASIC18.77■□□□□ 0.6
SEMA4DQ92854 SPDYE21P-201ENST00000413323 827 ntBASIC18.77■□□□□ 0.6
SEMA4DQ92854 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SEMA4DQ92854 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4DQ92854 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4DQ92854 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SEMA4DQ92854 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4DQ92854 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SEMA4DQ92854 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SEMA4DQ92854 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SEMA4DQ92854 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA4DQ92854 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.76■□□□□ 0.59
SEMA4DQ92854 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA4DQ92854 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA4DQ92854 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA4DQ92854 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.76■□□□□ 0.59
SEMA4DQ92854 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
SEMA4DQ92854 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms