Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 MIR3180-5-201ENST00000583743 153 ntBASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 AL365203.3-201ENST00000609742 2057 ntBASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC6LQ2NKX8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 AC116407.2-201ENST00000613639 860 ntBASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 HOXB1-202ENST00000577092 1414 ntBASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC6LQ2NKX8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 AC092384.3-202ENST00000564646 2873 ntBASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.54■□□□□ 0.56
ERCC6LQ2NKX8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms