Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 SLC25A1P2-201ENST00000430693 912 ntBASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 NUDT16P1-203ENST00000513809 620 ntBASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRDV1A0A1B0GX56 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 SEC1P-202ENST00000473944 940 ntBASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 C1QBPP2-201ENST00000528754 825 ntBASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 AC124947.2-201ENST00000547118 1133 ntBASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.41■□□□□ 0.06
TRDV1A0A1B0GX56 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRDV1A0A1B0GX56 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.39■□□□□ 0.05
TRDV1A0A1B0GX56 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms