Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNIH4Q9P003 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.71■■□□□ 1.23
CNIH4Q9P003 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.71■■□□□ 1.23
CNIH4Q9P003 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.71■■□□□ 1.23
CNIH4Q9P003 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.71■■□□□ 1.23
CNIH4Q9P003 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CNIH4Q9P003 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CNIH4Q9P003 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.7■■□□□ 1.22
CNIH4Q9P003 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.7■■□□□ 1.22
CNIH4Q9P003 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.7■■□□□ 1.22
CNIH4Q9P003 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CNIH4Q9P003 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.69■■□□□ 1.22
CNIH4Q9P003 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
CNIH4Q9P003 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNIH4Q9P003 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CNIH4Q9P003 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.68■■□□□ 1.22
CNIH4Q9P003 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNIH4Q9P003 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNIH4Q9P003 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNIH4Q9P003 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.67■■□□□ 1.22
CNIH4Q9P003 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNIH4Q9P003 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CNIH4Q9P003 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNIH4Q9P003 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.66■■□□□ 1.22
CNIH4Q9P003 SMPD5-203ENST00000639008 1464 ntBASIC22.66■■□□□ 1.22
CNIH4Q9P003 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNIH4Q9P003 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNIH4Q9P003 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNIH4Q9P003 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.65■■□□□ 1.22
CNIH4Q9P003 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNIH4Q9P003 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNIH4Q9P003 AC135731.1-201ENST00000569415 2548 ntBASIC22.65■■□□□ 1.22
CNIH4Q9P003 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.65■■□□□ 1.22
CNIH4Q9P003 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.65■■□□□ 1.22
CNIH4Q9P003 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNIH4Q9P003 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNIH4Q9P003 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.64■■□□□ 1.21
CNIH4Q9P003 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.64■■□□□ 1.21
CNIH4Q9P003 AP004609.3-201ENST00000610705 1884 ntBASIC22.64■■□□□ 1.21
CNIH4Q9P003 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CNIH4Q9P003 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.64■■□□□ 1.21
CNIH4Q9P003 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.63■■□□□ 1.21
CNIH4Q9P003 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.63■■□□□ 1.21
CNIH4Q9P003 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNIH4Q9P003 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNIH4Q9P003 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNIH4Q9P003 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNIH4Q9P003 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNIH4Q9P003 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.62■■□□□ 1.21
CNIH4Q9P003 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CNIH4Q9P003 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNIH4Q9P003 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CNIH4Q9P003 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.61■■□□□ 1.21
CNIH4Q9P003 AC025884.2-201ENST00000553429 711 ntBASIC22.61■■□□□ 1.21
CNIH4Q9P003 AC007029.1-201ENST00000604183 313 ntBASIC22.61■■□□□ 1.21
CNIH4Q9P003 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNIH4Q9P003 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNIH4Q9P003 AC145676.1-201ENST00000514988 2004 ntBASIC22.6■■□□□ 1.21
CNIH4Q9P003 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.6■■□□□ 1.21
CNIH4Q9P003 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNIH4Q9P003 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.6■■□□□ 1.21
CNIH4Q9P003 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNIH4Q9P003 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNIH4Q9P003 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.59■■□□□ 1.21
CNIH4Q9P003 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.59■■□□□ 1.21
CNIH4Q9P003 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.59■■□□□ 1.21
CNIH4Q9P003 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNIH4Q9P003 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CNIH4Q9P003 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNIH4Q9P003 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNIH4Q9P003 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNIH4Q9P003 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
CNIH4Q9P003 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CNIH4Q9P003 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.58■■□□□ 1.21
CNIH4Q9P003 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.58■■□□□ 1.21
CNIH4Q9P003 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNIH4Q9P003 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNIH4Q9P003 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNIH4Q9P003 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.57■■□□□ 1.2
CNIH4Q9P003 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.57■■□□□ 1.2
CNIH4Q9P003 NTF6A-201ENST00000591175 560 ntBASIC22.57■■□□□ 1.2
CNIH4Q9P003 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.57■■□□□ 1.2
CNIH4Q9P003 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNIH4Q9P003 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNIH4Q9P003 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNIH4Q9P003 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CNIH4Q9P003 AL359504.2-201ENST00000605506 1601 ntBASIC22.56■■□□□ 1.2
CNIH4Q9P003 MIR3960-201ENST00000583311 91 ntBASIC22.55■■□□□ 1.2
CNIH4Q9P003 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNIH4Q9P003 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CNIH4Q9P003 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.54■■□□□ 1.2
CNIH4Q9P003 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNIH4Q9P003 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.54■■□□□ 1.2
CNIH4Q9P003 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CNIH4Q9P003 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms