Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD9Q9P000 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD9Q9P000 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD9Q9P000 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD9Q9P000 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD9Q9P000 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
COMMD9Q9P000 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.5■□□□□ 0.87
COMMD9Q9P000 SUZ12P1-203ENST00000578195 985 ntBASIC20.5■□□□□ 0.87
COMMD9Q9P000 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.5■□□□□ 0.87
COMMD9Q9P000 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD9Q9P000 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD9Q9P000 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD9Q9P000 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COMMD9Q9P000 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.49■□□□□ 0.87
COMMD9Q9P000 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD9Q9P000 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.49■□□□□ 0.87
COMMD9Q9P000 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COMMD9Q9P000 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
COMMD9Q9P000 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD9Q9P000 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD9Q9P000 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD9Q9P000 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COMMD9Q9P000 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD9Q9P000 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD9Q9P000 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD9Q9P000 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD9Q9P000 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD9Q9P000 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD9Q9P000 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 PKD1P6-201ENST00000343738 4769 ntBASIC20.46■□□□□ 0.87
COMMD9Q9P000 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.46■□□□□ 0.87
COMMD9Q9P000 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 LINC00273-201ENST00000539813 1452 ntBASIC20.46■□□□□ 0.87
COMMD9Q9P000 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD9Q9P000 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.45■□□□□ 0.86
COMMD9Q9P000 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD9Q9P000 WHAMMP2-203ENST00000563942 1603 ntBASIC20.45■□□□□ 0.86
COMMD9Q9P000 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
COMMD9Q9P000 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COMMD9Q9P000 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COMMD9Q9P000 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.44■□□□□ 0.86
COMMD9Q9P000 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD9Q9P000 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD9Q9P000 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COMMD9Q9P000 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD9Q9P000 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COMMD9Q9P000 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD9Q9P000 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD9Q9P000 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COMMD9Q9P000 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
COMMD9Q9P000 AC133561.1-201ENST00000568600 2415 ntBASIC20.43■□□□□ 0.86
COMMD9Q9P000 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COMMD9Q9P000 AC142381.3-201ENST00000568208 1670 ntBASIC20.42■□□□□ 0.86
COMMD9Q9P000 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.42■□□□□ 0.86
COMMD9Q9P000 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD9Q9P000 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD9Q9P000 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD9Q9P000 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COMMD9Q9P000 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
COMMD9Q9P000 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD9Q9P000 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COMMD9Q9P000 AP004609.3-201ENST00000610705 1884 ntBASIC20.41■□□□□ 0.86
COMMD9Q9P000 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
COMMD9Q9P000 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.41■□□□□ 0.86
COMMD9Q9P000 MIR6090-201ENST00000622481 60 ntBASIC20.41■□□□□ 0.86
COMMD9Q9P000 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COMMD9Q9P000 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
COMMD9Q9P000 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COMMD9Q9P000 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COMMD9Q9P000 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms