Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NELFAQ9H3P2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
NELFAQ9H3P2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.64■■□□□ 1.05
NELFAQ9H3P2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.64■■□□□ 1.05
NELFAQ9H3P2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NELFAQ9H3P2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFAQ9H3P2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.63■■□□□ 1.05
NELFAQ9H3P2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NELFAQ9H3P2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NELFAQ9H3P2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NELFAQ9H3P2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NELFAQ9H3P2 RNF126P1-201ENST00000567452 1320 ntBASIC21.62■■□□□ 1.05
NELFAQ9H3P2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NELFAQ9H3P2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.62■■□□□ 1.05
NELFAQ9H3P2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFAQ9H3P2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFAQ9H3P2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFAQ9H3P2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NELFAQ9H3P2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NELFAQ9H3P2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NELFAQ9H3P2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NELFAQ9H3P2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NELFAQ9H3P2 RARRES2P2-201ENST00000394842 485 ntBASIC21.59■■□□□ 1.05
NELFAQ9H3P2 ECEL1P2-201ENST00000461596 1295 ntBASIC21.59■■□□□ 1.05
NELFAQ9H3P2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NELFAQ9H3P2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NELFAQ9H3P2 AL359504.2-201ENST00000605506 1601 ntBASIC21.58■■□□□ 1.05
NELFAQ9H3P2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
NELFAQ9H3P2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NELFAQ9H3P2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NELFAQ9H3P2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.58■■□□□ 1.05
NELFAQ9H3P2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NELFAQ9H3P2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NELFAQ9H3P2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFAQ9H3P2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFAQ9H3P2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
NELFAQ9H3P2 AC025884.2-201ENST00000553429 711 ntBASIC21.57■■□□□ 1.04
NELFAQ9H3P2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NELFAQ9H3P2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.57■■□□□ 1.04
NELFAQ9H3P2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 AC091060.1-201ENST00000623524 1766 ntBASIC21.56■■□□□ 1.04
NELFAQ9H3P2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NELFAQ9H3P2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFAQ9H3P2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NELFAQ9H3P2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFAQ9H3P2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NELFAQ9H3P2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NELFAQ9H3P2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFAQ9H3P2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NELFAQ9H3P2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFAQ9H3P2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NELFAQ9H3P2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.53■■□□□ 1.04
NELFAQ9H3P2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NELFAQ9H3P2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.53■■□□□ 1.04
NELFAQ9H3P2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
NELFAQ9H3P2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NELFAQ9H3P2 AC092803.2-201ENST00000564287 1899 ntBASIC21.52■■□□□ 1.04
NELFAQ9H3P2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
NELFAQ9H3P2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.52■■□□□ 1.04
NELFAQ9H3P2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 AC145676.1-201ENST00000514988 2004 ntBASIC21.51■■□□□ 1.03
NELFAQ9H3P2 SMPD5-203ENST00000639008 1464 ntBASIC21.51■■□□□ 1.03
NELFAQ9H3P2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NELFAQ9H3P2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.5■■□□□ 1.03
NELFAQ9H3P2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NELFAQ9H3P2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NELFAQ9H3P2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NELFAQ9H3P2 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.49■■□□□ 1.03
NELFAQ9H3P2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NELFAQ9H3P2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NELFAQ9H3P2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.48■■□□□ 1.03
NELFAQ9H3P2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NELFAQ9H3P2 AC007029.1-201ENST00000604183 313 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms