Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CRAMP1Q96RY5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.37■■■□□ 2.45
CRAMP1Q96RY5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CRAMP1Q96RY5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.37■■■□□ 2.45
CRAMP1Q96RY5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CRAMP1Q96RY5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 RPS2P7-201ENST00000447334 885 ntBASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CRAMP1Q96RY5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.35■■■□□ 2.45
CRAMP1Q96RY5 LONRF2P2-201ENST00000439212 571 ntBASIC30.34■■■□□ 2.45
CRAMP1Q96RY5 AL356441.2-201ENST00000443009 864 ntBASIC30.34■■■□□ 2.45
CRAMP1Q96RY5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.33■■■□□ 2.45
CRAMP1Q96RY5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CRAMP1Q96RY5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.31■■■□□ 2.44
CRAMP1Q96RY5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.31■■■□□ 2.44
CRAMP1Q96RY5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CRAMP1Q96RY5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.31■■■□□ 2.44
CRAMP1Q96RY5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.3■■■□□ 2.44
CRAMP1Q96RY5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
CRAMP1Q96RY5 AC019069.1-201ENST00000610008 1333 ntBASIC30.29■■■□□ 2.44
CRAMP1Q96RY5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CRAMP1Q96RY5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.29■■■□□ 2.44
CRAMP1Q96RY5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 AC239859.2-201ENST00000444165 318 ntBASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
CRAMP1Q96RY5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.27■■■□□ 2.44
CRAMP1Q96RY5 Z92544.1-202ENST00000571933 1220 ntBASIC30.27■■■□□ 2.44
CRAMP1Q96RY5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CRAMP1Q96RY5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
CRAMP1Q96RY5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CRAMP1Q96RY5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CRAMP1Q96RY5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CRAMP1Q96RY5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.25■■■□□ 2.43
CRAMP1Q96RY5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
CRAMP1Q96RY5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.25■■■□□ 2.43
CRAMP1Q96RY5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CRAMP1Q96RY5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CRAMP1Q96RY5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CRAMP1Q96RY5 ABCB10P1-201ENST00000614297 2181 ntBASIC30.24■■■□□ 2.43
CRAMP1Q96RY5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC30.24■■■□□ 2.43
CRAMP1Q96RY5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
CRAMP1Q96RY5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CRAMP1Q96RY5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CRAMP1Q96RY5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CRAMP1Q96RY5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CRAMP1Q96RY5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CRAMP1Q96RY5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CRAMP1Q96RY5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CRAMP1Q96RY5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
CRAMP1Q96RY5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CRAMP1Q96RY5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.19■■■□□ 2.42
CRAMP1Q96RY5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CRAMP1Q96RY5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CRAMP1Q96RY5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
CRAMP1Q96RY5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.18■■■□□ 2.42
CRAMP1Q96RY5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.18■■■□□ 2.42
CRAMP1Q96RY5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.17■■■□□ 2.42
CRAMP1Q96RY5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CRAMP1Q96RY5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms