Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.32■■□□□ 1.48
NAF1Q96HR8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NAF1Q96HR8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
NAF1Q96HR8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NAF1Q96HR8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.31■■□□□ 1.48
NAF1Q96HR8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 KRT18P60-201ENST00000312876 1297 ntBASIC24.3■■□□□ 1.48
NAF1Q96HR8 ATP5G2P3-201ENST00000429083 425 ntBASIC24.3■■□□□ 1.48
NAF1Q96HR8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.3■■□□□ 1.48
NAF1Q96HR8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.3■■□□□ 1.48
NAF1Q96HR8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
NAF1Q96HR8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
NAF1Q96HR8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.29■■□□□ 1.48
NAF1Q96HR8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NAF1Q96HR8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
NAF1Q96HR8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.29■■□□□ 1.48
NAF1Q96HR8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NAF1Q96HR8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NAF1Q96HR8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NAF1Q96HR8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.28■■□□□ 1.48
NAF1Q96HR8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.28■■□□□ 1.48
NAF1Q96HR8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.28■■□□□ 1.48
NAF1Q96HR8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NAF1Q96HR8 WHAMMP2-203ENST00000563942 1603 ntBASIC24.28■■□□□ 1.48
NAF1Q96HR8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
NAF1Q96HR8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
NAF1Q96HR8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
NAF1Q96HR8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NAF1Q96HR8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
NAF1Q96HR8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NAF1Q96HR8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
NAF1Q96HR8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
NAF1Q96HR8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.24■■□□□ 1.47
NAF1Q96HR8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NAF1Q96HR8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NAF1Q96HR8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
NAF1Q96HR8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
NAF1Q96HR8 AC110285.7-201ENST00000624417 1536 ntBASIC24.24■■□□□ 1.47
NAF1Q96HR8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NAF1Q96HR8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NAF1Q96HR8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.23■■□□□ 1.47
NAF1Q96HR8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.23■■□□□ 1.47
NAF1Q96HR8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NAF1Q96HR8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.23■■□□□ 1.47
NAF1Q96HR8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NAF1Q96HR8 AC127502.1-201ENST00000399971 1502 ntBASIC24.23■■□□□ 1.47
NAF1Q96HR8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
NAF1Q96HR8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
NAF1Q96HR8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NAF1Q96HR8 AC145676.1-201ENST00000514988 2004 ntBASIC24.22■■□□□ 1.47
NAF1Q96HR8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NAF1Q96HR8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.22■■□□□ 1.47
NAF1Q96HR8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.22■■□□□ 1.47
NAF1Q96HR8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
NAF1Q96HR8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NAF1Q96HR8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.22■■□□□ 1.47
NAF1Q96HR8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NAF1Q96HR8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NAF1Q96HR8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NAF1Q96HR8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
NAF1Q96HR8 AC135983.2-203ENST00000454486 1613 ntBASIC24.21■■□□□ 1.47
NAF1Q96HR8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.2■■□□□ 1.47
NAF1Q96HR8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
NAF1Q96HR8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
NAF1Q96HR8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
NAF1Q96HR8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.19■■□□□ 1.46
NAF1Q96HR8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NAF1Q96HR8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.18■■□□□ 1.46
NAF1Q96HR8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NAF1Q96HR8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NAF1Q96HR8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
NAF1Q96HR8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.17■■□□□ 1.46
NAF1Q96HR8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
NAF1Q96HR8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 LINC01003-201ENST00000564834 1764 ntBASIC24.17■■□□□ 1.46
NAF1Q96HR8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NAF1Q96HR8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
NAF1Q96HR8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
NAF1Q96HR8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NAF1Q96HR8 AC148477.6-201ENST00000623746 465 ntBASIC24.16■■□□□ 1.46
NAF1Q96HR8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NAF1Q96HR8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NAF1Q96HR8 MIR219A2-201ENST00000608502 1504 ntBASIC24.15■■□□□ 1.46
NAF1Q96HR8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NAF1Q96HR8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NAF1Q96HR8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms