Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 ECEL1P2-201ENST00000461596 1295 ntBASIC20.4■□□□□ 0.86
ZNRF1Q8ND25 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNRF1Q8ND25 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNRF1Q8ND25 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNRF1Q8ND25 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNRF1Q8ND25 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
ZNRF1Q8ND25 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNRF1Q8ND25 SMPD5-203ENST00000639008 1464 ntBASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNRF1Q8ND25 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNRF1Q8ND25 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 AC025884.2-201ENST00000553429 711 ntBASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 HSD17B1P1-201ENST00000590052 955 ntBASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNRF1Q8ND25 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNRF1Q8ND25 RNF126P1-201ENST00000567452 1320 ntBASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZNRF1Q8ND25 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.33■□□□□ 0.85
ZNRF1Q8ND25 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.33■□□□□ 0.85
ZNRF1Q8ND25 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNRF1Q8ND25 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNRF1Q8ND25 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNRF1Q8ND25 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.32■□□□□ 0.84
ZNRF1Q8ND25 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.32■□□□□ 0.84
ZNRF1Q8ND25 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNRF1Q8ND25 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNRF1Q8ND25 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 MIR3960-201ENST00000583311 91 ntBASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNRF1Q8ND25 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 AC091060.1-201ENST00000623524 1766 ntBASIC20.29■□□□□ 0.84
ZNRF1Q8ND25 AC092803.2-201ENST00000564287 1899 ntBASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 AC007029.1-201ENST00000604183 313 ntBASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNRF1Q8ND25 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNRF1Q8ND25 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 RARRES2P2-201ENST00000394842 485 ntBASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 RP9P-202ENST00000450133 1212 ntBASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNRF1Q8ND25 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNRF1Q8ND25 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF1Q8ND25 AC093536.1-201ENST00000569153 554 ntBASIC20.24■□□□□ 0.83
ZNRF1Q8ND25 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNRF1Q8ND25 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms