Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C11orf42Q8N5U0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
C11orf42Q8N5U0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.14■□□□□ 0.81
C11orf42Q8N5U0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C11orf42Q8N5U0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.14■□□□□ 0.81
C11orf42Q8N5U0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C11orf42Q8N5U0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.12■□□□□ 0.81
C11orf42Q8N5U0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf42Q8N5U0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf42Q8N5U0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf42Q8N5U0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.11■□□□□ 0.81
C11orf42Q8N5U0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
C11orf42Q8N5U0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.1■□□□□ 0.81
C11orf42Q8N5U0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.09■□□□□ 0.81
C11orf42Q8N5U0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 AC007029.1-201ENST00000604183 313 ntBASIC20.08■□□□□ 0.81
C11orf42Q8N5U0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
C11orf42Q8N5U0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
C11orf42Q8N5U0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C11orf42Q8N5U0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
C11orf42Q8N5U0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
C11orf42Q8N5U0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C11orf42Q8N5U0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C11orf42Q8N5U0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C11orf42Q8N5U0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C11orf42Q8N5U0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C11orf42Q8N5U0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
C11orf42Q8N5U0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.05■□□□□ 0.8
C11orf42Q8N5U0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 MIR3960-201ENST00000583311 91 ntBASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
C11orf42Q8N5U0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 RP9P-202ENST00000450133 1212 ntBASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C11orf42Q8N5U0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
C11orf42Q8N5U0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.02■□□□□ 0.79
C11orf42Q8N5U0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.01■□□□□ 0.79
C11orf42Q8N5U0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
C11orf42Q8N5U0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
C11orf42Q8N5U0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms