Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CROCCP3Q8IVE0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CROCCP3Q8IVE0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CROCCP3Q8IVE0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CROCCP3Q8IVE0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CROCCP3Q8IVE0 AL024507.2-201ENST00000606070 2574 ntBASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 AC018358.1-201ENST00000631079 1402 ntBASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CROCCP3Q8IVE0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CROCCP3Q8IVE0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CROCCP3Q8IVE0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CROCCP3Q8IVE0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CROCCP3Q8IVE0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CROCCP3Q8IVE0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.9■■□□□ 1.1
CROCCP3Q8IVE0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CROCCP3Q8IVE0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CROCCP3Q8IVE0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 AP002365.1-201ENST00000603448 772 ntBASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CROCCP3Q8IVE0 AC138932.3-201ENST00000567634 1902 ntBASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.88■■□□□ 1.09
CROCCP3Q8IVE0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
CROCCP3Q8IVE0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CROCCP3Q8IVE0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CROCCP3Q8IVE0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CROCCP3Q8IVE0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CROCCP3Q8IVE0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.83■■□□□ 1.09
CROCCP3Q8IVE0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CROCCP3Q8IVE0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CROCCP3Q8IVE0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms