Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SFR1Q86XK3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SFR1Q86XK3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.02■■□□□ 1.92
SFR1Q86XK3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SFR1Q86XK3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SFR1Q86XK3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
SFR1Q86XK3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27■■□□□ 1.91
SFR1Q86XK3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27■■□□□ 1.91
SFR1Q86XK3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27■■□□□ 1.91
SFR1Q86XK3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SFR1Q86XK3 SMPD5-203ENST00000639008 1464 ntBASIC27■■□□□ 1.91
SFR1Q86XK3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SFR1Q86XK3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.99■■□□□ 1.91
SFR1Q86XK3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SFR1Q86XK3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SFR1Q86XK3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SFR1Q86XK3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SFR1Q86XK3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.98■■□□□ 1.91
SFR1Q86XK3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SFR1Q86XK3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SFR1Q86XK3 AC091060.1-201ENST00000623524 1766 ntBASIC26.97■■□□□ 1.91
SFR1Q86XK3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.97■■□□□ 1.91
SFR1Q86XK3 HSD17B1P1-201ENST00000590052 955 ntBASIC26.97■■□□□ 1.91
SFR1Q86XK3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SFR1Q86XK3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SFR1Q86XK3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SFR1Q86XK3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.96■■□□□ 1.91
SFR1Q86XK3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.96■■□□□ 1.91
SFR1Q86XK3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SFR1Q86XK3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.96■■□□□ 1.91
SFR1Q86XK3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SFR1Q86XK3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SFR1Q86XK3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SFR1Q86XK3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SFR1Q86XK3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SFR1Q86XK3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SFR1Q86XK3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.95■■□□□ 1.91
SFR1Q86XK3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SFR1Q86XK3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.95■■□□□ 1.9
SFR1Q86XK3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
SFR1Q86XK3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
SFR1Q86XK3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SFR1Q86XK3 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.94■■□□□ 1.9
SFR1Q86XK3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.94■■□□□ 1.9
SFR1Q86XK3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.94■■□□□ 1.9
SFR1Q86XK3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.94■■□□□ 1.9
SFR1Q86XK3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.94■■□□□ 1.9
SFR1Q86XK3 AC092803.2-201ENST00000564287 1899 ntBASIC26.93■■□□□ 1.9
SFR1Q86XK3 RNF126P1-201ENST00000567452 1320 ntBASIC26.93■■□□□ 1.9
SFR1Q86XK3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.93■■□□□ 1.9
SFR1Q86XK3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.93■■□□□ 1.9
SFR1Q86XK3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SFR1Q86XK3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
SFR1Q86XK3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SFR1Q86XK3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.92■■□□□ 1.9
SFR1Q86XK3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SFR1Q86XK3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.91■■□□□ 1.9
SFR1Q86XK3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SFR1Q86XK3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.91■■□□□ 1.9
SFR1Q86XK3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SFR1Q86XK3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.91■■□□□ 1.9
SFR1Q86XK3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SFR1Q86XK3 MIR3960-201ENST00000583311 91 ntBASIC26.9■■□□□ 1.9
SFR1Q86XK3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SFR1Q86XK3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.9■■□□□ 1.9
SFR1Q86XK3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
SFR1Q86XK3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SFR1Q86XK3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.89■■□□□ 1.9
SFR1Q86XK3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SFR1Q86XK3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SFR1Q86XK3 AC007029.1-201ENST00000604183 313 ntBASIC26.89■■□□□ 1.9
SFR1Q86XK3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.88■■□□□ 1.89
SFR1Q86XK3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SFR1Q86XK3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
SFR1Q86XK3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SFR1Q86XK3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SFR1Q86XK3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SFR1Q86XK3 RP9P-202ENST00000450133 1212 ntBASIC26.86■■□□□ 1.89
SFR1Q86XK3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SFR1Q86XK3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SFR1Q86XK3 ERN1-208ENST00000606895 2068 ntBASIC26.86■■□□□ 1.89
SFR1Q86XK3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
SFR1Q86XK3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.86■■□□□ 1.89
SFR1Q86XK3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.85■■□□□ 1.89
SFR1Q86XK3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SFR1Q86XK3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SFR1Q86XK3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.85■■□□□ 1.89
SFR1Q86XK3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SFR1Q86XK3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SFR1Q86XK3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SFR1Q86XK3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.84■■□□□ 1.89
SFR1Q86XK3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SFR1Q86XK3 RARRES2P2-201ENST00000394842 485 ntBASIC26.84■■□□□ 1.89
SFR1Q86XK3 AC093536.1-201ENST00000569153 554 ntBASIC26.84■■□□□ 1.89
SFR1Q86XK3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.84■■□□□ 1.89
SFR1Q86XK3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.84■■□□□ 1.89
SFR1Q86XK3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.84■■□□□ 1.89
SFR1Q86XK3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SFR1Q86XK3 AC145676.1-201ENST00000514988 2004 ntBASIC26.83■■□□□ 1.89
SFR1Q86XK3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms