Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC28Q86X40 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRRC28Q86X40 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC28Q86X40 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRC28Q86X40 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRC28Q86X40 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRC28Q86X40 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LRRC28Q86X40 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.52■■□□□ 1.04
LRRC28Q86X40 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRC28Q86X40 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LRRC28Q86X40 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.52■■□□□ 1.04
LRRC28Q86X40 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC28Q86X40 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
LRRC28Q86X40 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRC28Q86X40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.51■■□□□ 1.03
LRRC28Q86X40 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.51■■□□□ 1.03
LRRC28Q86X40 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC28Q86X40 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC28Q86X40 AP004609.3-201ENST00000610705 1884 ntBASIC21.51■■□□□ 1.03
LRRC28Q86X40 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRC28Q86X40 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC28Q86X40 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC28Q86X40 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC28Q86X40 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC28Q86X40 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRRC28Q86X40 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRRC28Q86X40 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRC28Q86X40 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LRRC28Q86X40 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC28Q86X40 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC28Q86X40 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC28Q86X40 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRC28Q86X40 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRC28Q86X40 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LRRC28Q86X40 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LRRC28Q86X40 MIR4449-201ENST00000578365 66 ntBASIC21.46■■□□□ 1.03
LRRC28Q86X40 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.46■■□□□ 1.03
LRRC28Q86X40 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LRRC28Q86X40 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRC28Q86X40 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.45■■□□□ 1.02
LRRC28Q86X40 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC28Q86X40 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRC28Q86X40 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRC28Q86X40 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC28Q86X40 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC28Q86X40 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.44■■□□□ 1.02
LRRC28Q86X40 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC28Q86X40 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRC28Q86X40 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.44■■□□□ 1.02
LRRC28Q86X40 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC28Q86X40 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC28Q86X40 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC28Q86X40 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRC28Q86X40 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC28Q86X40 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC28Q86X40 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
LRRC28Q86X40 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRC28Q86X40 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC28Q86X40 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.41■■□□□ 1.02
LRRC28Q86X40 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LRRC28Q86X40 AC142381.3-201ENST00000568208 1670 ntBASIC21.4■■□□□ 1.02
LRRC28Q86X40 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LRRC28Q86X40 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC28Q86X40 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC28Q86X40 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC28Q86X40 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC28Q86X40 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRRC28Q86X40 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LRRC28Q86X40 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC28Q86X40 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC28Q86X40 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC28Q86X40 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LRRC28Q86X40 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC28Q86X40 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LRRC28Q86X40 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LRRC28Q86X40 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC28Q86X40 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC28Q86X40 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC28Q86X40 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.37■■□□□ 1.01
LRRC28Q86X40 AC110285.7-201ENST00000624417 1536 ntBASIC21.37■■□□□ 1.01
LRRC28Q86X40 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.37■■□□□ 1.01
LRRC28Q86X40 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRRC28Q86X40 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.36■■□□□ 1.01
LRRC28Q86X40 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRRC28Q86X40 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRC28Q86X40 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.35■■□□□ 1.01
LRRC28Q86X40 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRRC28Q86X40 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms