Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRTM4Q86VH4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24■■□□□ 1.43
LRRTM4Q86VH4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRRTM4Q86VH4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRRTM4Q86VH4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24■■□□□ 1.43
LRRTM4Q86VH4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
LRRTM4Q86VH4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.99■■□□□ 1.43
LRRTM4Q86VH4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.99■■□□□ 1.43
LRRTM4Q86VH4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM4Q86VH4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.99■■□□□ 1.43
LRRTM4Q86VH4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRRTM4Q86VH4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRRTM4Q86VH4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.97■■□□□ 1.43
LRRTM4Q86VH4 AC012354.3-201ENST00000623734 483 ntBASIC23.97■■□□□ 1.43
LRRTM4Q86VH4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LRRTM4Q86VH4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LRRTM4Q86VH4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRRTM4Q86VH4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.94■■□□□ 1.42
LRRTM4Q86VH4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRTM4Q86VH4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 AC129492.7-201ENST00000622992 756 ntBASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRRTM4Q86VH4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 AL121749.1-202ENST00000609313 2153 ntBASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRTM4Q86VH4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRTM4Q86VH4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRTM4Q86VH4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRTM4Q86VH4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.42
LRRTM4Q86VH4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LRRTM4Q86VH4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LRRTM4Q86VH4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 AC004987.1-201ENST00000428627 508 ntBASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRTM4Q86VH4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 ATP5G2P3-201ENST00000429083 425 ntBASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.87■■□□□ 1.41
LRRTM4Q86VH4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.86■■□□□ 1.41
LRRTM4Q86VH4 TSPY13P-201ENST00000338964 914 ntBASIC23.86■■□□□ 1.41
LRRTM4Q86VH4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.86■■□□□ 1.41
LRRTM4Q86VH4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.86■■□□□ 1.41
LRRTM4Q86VH4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRTM4Q86VH4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRRTM4Q86VH4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRRTM4Q86VH4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRRTM4Q86VH4 DUX4L9-201ENST00000449051 1259 ntBASIC23.85■■□□□ 1.41
LRRTM4Q86VH4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms