Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NFE4Q86UQ8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFE4Q86UQ8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFE4Q86UQ8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NFE4Q86UQ8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NFE4Q86UQ8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.24■□□□□ 0.35
NFE4Q86UQ8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NFE4Q86UQ8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFE4Q86UQ8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NFE4Q86UQ8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 AC008813.1-201ENST00000536597 885 ntBASIC17.22■□□□□ 0.35
NFE4Q86UQ8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFE4Q86UQ8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFE4Q86UQ8 AC135983.2-203ENST00000454486 1613 ntBASIC17.21■□□□□ 0.35
NFE4Q86UQ8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFE4Q86UQ8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFE4Q86UQ8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFE4Q86UQ8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFE4Q86UQ8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.21■□□□□ 0.34
NFE4Q86UQ8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.2■□□□□ 0.34
NFE4Q86UQ8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFE4Q86UQ8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.2■□□□□ 0.34
NFE4Q86UQ8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
NFE4Q86UQ8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.18■□□□□ 0.34
NFE4Q86UQ8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.18■□□□□ 0.34
NFE4Q86UQ8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NFE4Q86UQ8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NFE4Q86UQ8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.16■□□□□ 0.34
NFE4Q86UQ8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 WHAMMP2-203ENST00000563942 1603 ntBASIC17.15■□□□□ 0.34
NFE4Q86UQ8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NFE4Q86UQ8 ERN1-208ENST00000606895 2068 ntBASIC17.14■□□□□ 0.33
NFE4Q86UQ8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.14■□□□□ 0.33
NFE4Q86UQ8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFE4Q86UQ8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFE4Q86UQ8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NFE4Q86UQ8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms