Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC025884.2-201ENST00000553429 711 ntBASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 AC022413.1-201ENST00000624602 984 ntBASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COLCA1Q6ZS62 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 DUSP8P4-201ENST00000399538 1761 ntBASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.09■□□□□ 0.97
COLCA1Q6ZS62 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COLCA1Q6ZS62 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.08■□□□□ 0.97
COLCA1Q6ZS62 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COLCA1Q6ZS62 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.08■□□□□ 0.96
COLCA1Q6ZS62 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COLCA1Q6ZS62 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
COLCA1Q6ZS62 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COLCA1Q6ZS62 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COLCA1Q6ZS62 ECEL1P2-201ENST00000461596 1295 ntBASIC21.07■□□□□ 0.96
COLCA1Q6ZS62 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.07■□□□□ 0.96
COLCA1Q6ZS62 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.07■□□□□ 0.96
COLCA1Q6ZS62 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COLCA1Q6ZS62 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COLCA1Q6ZS62 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COLCA1Q6ZS62 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COLCA1Q6ZS62 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COLCA1Q6ZS62 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COLCA1Q6ZS62 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COLCA1Q6ZS62 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COLCA1Q6ZS62 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.03■□□□□ 0.96
COLCA1Q6ZS62 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 SMPD5-203ENST00000639008 1464 ntBASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.02■□□□□ 0.96
COLCA1Q6ZS62 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COLCA1Q6ZS62 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
COLCA1Q6ZS62 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COLCA1Q6ZS62 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COLCA1Q6ZS62 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
COLCA1Q6ZS62 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21■□□□□ 0.95
COLCA1Q6ZS62 GPX1-201ENST00000419349 1106 ntBASIC21■□□□□ 0.95
COLCA1Q6ZS62 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COLCA1Q6ZS62 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21■□□□□ 0.95
COLCA1Q6ZS62 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 AC010501.1-201ENST00000606270 1962 ntBASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.99■□□□□ 0.95
COLCA1Q6ZS62 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COLCA1Q6ZS62 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 ERN1-208ENST00000606895 2068 ntBASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COLCA1Q6ZS62 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
COLCA1Q6ZS62 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COLCA1Q6ZS62 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms