Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DCLRE1AQ6PJP8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.23■■□□□ 1.79
DCLRE1AQ6PJP8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 BHLHE23-202ENST00000612929 1109 ntBASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
DCLRE1AQ6PJP8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DCLRE1AQ6PJP8 AC074183.2-201ENST00000623112 922 ntBASIC26.21■■□□□ 1.79
DCLRE1AQ6PJP8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DCLRE1AQ6PJP8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DCLRE1AQ6PJP8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
DCLRE1AQ6PJP8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
DCLRE1AQ6PJP8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
DCLRE1AQ6PJP8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.2■■□□□ 1.78
DCLRE1AQ6PJP8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DCLRE1AQ6PJP8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DCLRE1AQ6PJP8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DCLRE1AQ6PJP8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.18■■□□□ 1.78
DCLRE1AQ6PJP8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DCLRE1AQ6PJP8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.18■■□□□ 1.78
DCLRE1AQ6PJP8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DCLRE1AQ6PJP8 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.17■■□□□ 1.78
DCLRE1AQ6PJP8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.17■■□□□ 1.78
DCLRE1AQ6PJP8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DCLRE1AQ6PJP8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
DCLRE1AQ6PJP8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
DCLRE1AQ6PJP8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.16■■□□□ 1.78
DCLRE1AQ6PJP8 AC139795.1-202ENST00000500444 432 ntBASIC26.16■■□□□ 1.78
DCLRE1AQ6PJP8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.15■■□□□ 1.78
DCLRE1AQ6PJP8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 AC010980.1-201ENST00000587192 1142 ntBASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
DCLRE1AQ6PJP8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
DCLRE1AQ6PJP8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.77
DCLRE1AQ6PJP8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.13■■□□□ 1.77
DCLRE1AQ6PJP8 AC142472.1-201ENST00000612013 1741 ntBASIC26.12■■□□□ 1.77
DCLRE1AQ6PJP8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.12■■□□□ 1.77
DCLRE1AQ6PJP8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.12■■□□□ 1.77
DCLRE1AQ6PJP8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.12■■□□□ 1.77
DCLRE1AQ6PJP8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.12■■□□□ 1.77
DCLRE1AQ6PJP8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DCLRE1AQ6PJP8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DCLRE1AQ6PJP8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
DCLRE1AQ6PJP8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DCLRE1AQ6PJP8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DCLRE1AQ6PJP8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.1■■□□□ 1.77
DCLRE1AQ6PJP8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
DCLRE1AQ6PJP8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
DCLRE1AQ6PJP8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.09■■□□□ 1.77
DCLRE1AQ6PJP8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
DCLRE1AQ6PJP8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.09■■□□□ 1.77
DCLRE1AQ6PJP8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.08■■□□□ 1.77
DCLRE1AQ6PJP8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
DCLRE1AQ6PJP8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
DCLRE1AQ6PJP8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
DCLRE1AQ6PJP8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
DCLRE1AQ6PJP8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DCLRE1AQ6PJP8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.05■■□□□ 1.76
DCLRE1AQ6PJP8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.05■■□□□ 1.76
DCLRE1AQ6PJP8 PVT1_1.1-201ENST00000615125 194 ntBASIC26.05■■□□□ 1.76
DCLRE1AQ6PJP8 AP004609.3-201ENST00000610705 1884 ntBASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
DCLRE1AQ6PJP8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
DCLRE1AQ6PJP8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
DCLRE1AQ6PJP8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms