Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF43Q68DV7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.46■■□□□ 1.67
RNF43Q68DV7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF43Q68DV7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.46■■□□□ 1.67
RNF43Q68DV7 RARRES2P1-201ENST00000474487 481 ntBASIC25.46■■□□□ 1.67
RNF43Q68DV7 AC007029.1-201ENST00000604183 313 ntBASIC25.46■■□□□ 1.67
RNF43Q68DV7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF43Q68DV7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF43Q68DV7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF43Q68DV7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF43Q68DV7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF43Q68DV7 WHAMMP3-201ENST00000611636 1609 ntBASIC25.45■■□□□ 1.66
RNF43Q68DV7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF43Q68DV7 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.44■■□□□ 1.66
RNF43Q68DV7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF43Q68DV7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNF43Q68DV7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.44■■□□□ 1.66
RNF43Q68DV7 AC004987.1-201ENST00000428627 508 ntBASIC25.44■■□□□ 1.66
RNF43Q68DV7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RNF43Q68DV7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.44■■□□□ 1.66
RNF43Q68DV7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF43Q68DV7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF43Q68DV7 LINC01003-201ENST00000564834 1764 ntBASIC25.44■■□□□ 1.66
RNF43Q68DV7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF43Q68DV7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.43■■□□□ 1.66
RNF43Q68DV7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF43Q68DV7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.43■■□□□ 1.66
RNF43Q68DV7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF43Q68DV7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
RNF43Q68DV7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF43Q68DV7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF43Q68DV7 SMPD5-203ENST00000639008 1464 ntBASIC25.42■■□□□ 1.66
RNF43Q68DV7 ATP5G2P3-201ENST00000429083 425 ntBASIC25.42■■□□□ 1.66
RNF43Q68DV7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
RNF43Q68DV7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.41■■□□□ 1.66
RNF43Q68DV7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF43Q68DV7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF43Q68DV7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.41■■□□□ 1.66
RNF43Q68DV7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RNF43Q68DV7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RNF43Q68DV7 KRT18P60-201ENST00000312876 1297 ntBASIC25.4■■□□□ 1.66
RNF43Q68DV7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF43Q68DV7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.4■■□□□ 1.66
RNF43Q68DV7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RNF43Q68DV7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RNF43Q68DV7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF43Q68DV7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.39■■□□□ 1.66
RNF43Q68DV7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF43Q68DV7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RNF43Q68DV7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.39■■□□□ 1.66
RNF43Q68DV7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
RNF43Q68DV7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.39■■□□□ 1.66
RNF43Q68DV7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
RNF43Q68DV7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF43Q68DV7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF43Q68DV7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.38■■□□□ 1.65
RNF43Q68DV7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF43Q68DV7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
RNF43Q68DV7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.37■■□□□ 1.65
RNF43Q68DV7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF43Q68DV7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RNF43Q68DV7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.36■■□□□ 1.65
RNF43Q68DV7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RNF43Q68DV7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.36■■□□□ 1.65
RNF43Q68DV7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RNF43Q68DV7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF43Q68DV7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF43Q68DV7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF43Q68DV7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF43Q68DV7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RNF43Q68DV7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.34■■□□□ 1.65
RNF43Q68DV7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.33■■□□□ 1.65
RNF43Q68DV7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RNF43Q68DV7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
RNF43Q68DV7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF43Q68DV7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF43Q68DV7 AC009831.1-201ENST00000580420 1582 ntBASIC25.32■■□□□ 1.64
RNF43Q68DV7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RNF43Q68DV7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
RNF43Q68DV7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF43Q68DV7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF43Q68DV7 AL359504.2-201ENST00000605506 1601 ntBASIC25.31■■□□□ 1.64
RNF43Q68DV7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.31■■□□□ 1.64
RNF43Q68DV7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF43Q68DV7 AC026202.3-201ENST00000600805 1127 ntBASIC25.31■■□□□ 1.64
RNF43Q68DV7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF43Q68DV7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF43Q68DV7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.31■■□□□ 1.64
RNF43Q68DV7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF43Q68DV7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF43Q68DV7 RP9P-202ENST00000450133 1212 ntBASIC25.3■■□□□ 1.64
RNF43Q68DV7 RAP2CP1-202ENST00000605179 643 ntBASIC25.3■■□□□ 1.64
RNF43Q68DV7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNF43Q68DV7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF43Q68DV7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF43Q68DV7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
RNF43Q68DV7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF43Q68DV7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF43Q68DV7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF43Q68DV7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms