Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.14■□□□□ 0.49
CMC4P56277 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.14■□□□□ 0.49
CMC4P56277 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CMC4P56277 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CMC4P56277 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CMC4P56277 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CMC4P56277 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.13■□□□□ 0.49
CMC4P56277 AC133552.2-201ENST00000619106 1032 ntBASIC18.13■□□□□ 0.49
CMC4P56277 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CMC4P56277 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CMC4P56277 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.12■□□□□ 0.49
CMC4P56277 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.12■□□□□ 0.49
CMC4P56277 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.12■□□□□ 0.49
CMC4P56277 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.12■□□□□ 0.49
CMC4P56277 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CMC4P56277 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CMC4P56277 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CMC4P56277 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMC4P56277 AC026202.3-201ENST00000600805 1127 ntBASIC18.11■□□□□ 0.49
CMC4P56277 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMC4P56277 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.11■□□□□ 0.49
CMC4P56277 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CMC4P56277 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CMC4P56277 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.1■□□□□ 0.49
CMC4P56277 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.1■□□□□ 0.49
CMC4P56277 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CMC4P56277 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CMC4P56277 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMC4P56277 NTF6A-201ENST00000591175 560 ntBASIC18.09■□□□□ 0.49
CMC4P56277 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.09■□□□□ 0.49
CMC4P56277 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMC4P56277 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CMC4P56277 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CMC4P56277 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CMC4P56277 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CMC4P56277 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CMC4P56277 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CMC4P56277 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CMC4P56277 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CMC4P56277 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CMC4P56277 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.08■□□□□ 0.48
CMC4P56277 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.08■□□□□ 0.48
CMC4P56277 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CMC4P56277 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CMC4P56277 RAP2CP1-202ENST00000605179 643 ntBASIC18.07■□□□□ 0.48
CMC4P56277 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CMC4P56277 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CMC4P56277 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
CMC4P56277 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 AC009831.1-201ENST00000580420 1582 ntBASIC18.05■□□□□ 0.48
CMC4P56277 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CMC4P56277 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CMC4P56277 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CMC4P56277 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CMC4P56277 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CMC4P56277 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.04■□□□□ 0.48
CMC4P56277 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.04■□□□□ 0.48
CMC4P56277 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.04■□□□□ 0.48
CMC4P56277 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.03■□□□□ 0.48
CMC4P56277 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CMC4P56277 AC018755.3-202ENST00000596210 929 ntBASIC18.03■□□□□ 0.48
CMC4P56277 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CMC4P56277 AL121749.1-202ENST00000609313 2153 ntBASIC18.03■□□□□ 0.48
CMC4P56277 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms