Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SLC6A12P48065 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SLC6A12P48065 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.64■■□□□ 1.37
SLC6A12P48065 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SLC6A12P48065 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.64■■□□□ 1.37
SLC6A12P48065 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A12P48065 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.63■■□□□ 1.37
SLC6A12P48065 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SLC6A12P48065 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A12P48065 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SLC6A12P48065 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
SLC6A12P48065 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SLC6A12P48065 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 AC092296.2-201ENST00000589470 999 ntBASIC23.61■■□□□ 1.37
SLC6A12P48065 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SLC6A12P48065 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.6■■□□□ 1.37
SLC6A12P48065 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SLC6A12P48065 ERN1-208ENST00000606895 2068 ntBASIC23.6■■□□□ 1.37
SLC6A12P48065 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.59■■□□□ 1.37
SLC6A12P48065 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.59■■□□□ 1.37
SLC6A12P48065 AC025884.2-201ENST00000553429 711 ntBASIC23.59■■□□□ 1.37
SLC6A12P48065 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SLC6A12P48065 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SLC6A12P48065 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A12P48065 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.58■■□□□ 1.37
SLC6A12P48065 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SLC6A12P48065 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.58■■□□□ 1.37
SLC6A12P48065 AC010501.1-201ENST00000606270 1962 ntBASIC23.58■■□□□ 1.36
SLC6A12P48065 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SLC6A12P48065 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SLC6A12P48065 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.56■■□□□ 1.36
SLC6A12P48065 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SLC6A12P48065 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SLC6A12P48065 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A12P48065 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.55■■□□□ 1.36
SLC6A12P48065 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SLC6A12P48065 AC022413.1-201ENST00000624602 984 ntBASIC23.55■■□□□ 1.36
SLC6A12P48065 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC6A12P48065 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SLC6A12P48065 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.55■■□□□ 1.36
SLC6A12P48065 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A12P48065 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SLC6A12P48065 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.54■■□□□ 1.36
SLC6A12P48065 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.54■■□□□ 1.36
SLC6A12P48065 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.54■■□□□ 1.36
SLC6A12P48065 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SLC6A12P48065 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.53■■□□□ 1.36
SLC6A12P48065 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.52■■□□□ 1.36
SLC6A12P48065 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SLC6A12P48065 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SLC6A12P48065 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.51■■□□□ 1.35
SLC6A12P48065 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 ECEL1P2-201ENST00000461596 1295 ntBASIC23.51■■□□□ 1.35
SLC6A12P48065 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.51■■□□□ 1.35
SLC6A12P48065 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC6A12P48065 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.5■■□□□ 1.35
SLC6A12P48065 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC6A12P48065 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SLC6A12P48065 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC6A12P48065 SMPD5-203ENST00000639008 1464 ntBASIC23.49■■□□□ 1.35
SLC6A12P48065 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A12P48065 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A12P48065 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms