Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHRNA5P30532 AP002414.2-202ENST00000590929 1450 ntBASIC30.62■■■□□ 2.49
CHRNA5P30532 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHRNA5P30532 RPS2P7-201ENST00000447334 885 ntBASIC30.61■■■□□ 2.49
CHRNA5P30532 UNC93B8-201ENST00000511903 705 ntBASIC30.61■■■□□ 2.49
CHRNA5P30532 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHRNA5P30532 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHRNA5P30532 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CHRNA5P30532 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
CHRNA5P30532 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.6■■■□□ 2.49
CHRNA5P30532 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.6■■■□□ 2.49
CHRNA5P30532 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.59■■■□□ 2.49
CHRNA5P30532 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHRNA5P30532 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHRNA5P30532 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.59■■■□□ 2.49
CHRNA5P30532 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.59■■■□□ 2.49
CHRNA5P30532 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHRNA5P30532 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHRNA5P30532 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
CHRNA5P30532 KRT125P-201ENST00000546827 989 ntBASIC30.58■■■□□ 2.49
CHRNA5P30532 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.58■■■□□ 2.49
CHRNA5P30532 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.58■■■□□ 2.49
CHRNA5P30532 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHRNA5P30532 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CHRNA5P30532 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHRNA5P30532 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CHRNA5P30532 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.57■■■□□ 2.48
CHRNA5P30532 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC30.57■■■□□ 2.48
CHRNA5P30532 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.57■■■□□ 2.48
CHRNA5P30532 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.57■■■□□ 2.48
CHRNA5P30532 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CHRNA5P30532 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
CHRNA5P30532 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHRNA5P30532 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHRNA5P30532 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHRNA5P30532 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CHRNA5P30532 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHRNA5P30532 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.55■■■□□ 2.48
CHRNA5P30532 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHRNA5P30532 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
CHRNA5P30532 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.54■■■□□ 2.48
CHRNA5P30532 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
CHRNA5P30532 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHRNA5P30532 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHRNA5P30532 AL139393.2-201ENST00000608721 2025 ntBASIC30.53■■■□□ 2.48
CHRNA5P30532 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHRNA5P30532 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.53■■■□□ 2.48
CHRNA5P30532 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHRNA5P30532 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHRNA5P30532 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHRNA5P30532 KRT16P3-201ENST00000439127 1283 ntBASIC30.52■■■□□ 2.48
CHRNA5P30532 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.52■■■□□ 2.48
CHRNA5P30532 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.52■■■□□ 2.48
CHRNA5P30532 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHRNA5P30532 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.52■■■□□ 2.48
CHRNA5P30532 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHRNA5P30532 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHRNA5P30532 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CHRNA5P30532 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CHRNA5P30532 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHRNA5P30532 BX664725.1-201ENST00000438252 379 ntBASIC30.51■■■□□ 2.47
CHRNA5P30532 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.51■■■□□ 2.47
CHRNA5P30532 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.5■■■□□ 2.47
CHRNA5P30532 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHRNA5P30532 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHRNA5P30532 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHRNA5P30532 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHRNA5P30532 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.49■■■□□ 2.47
CHRNA5P30532 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHRNA5P30532 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHRNA5P30532 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.48■■■□□ 2.47
CHRNA5P30532 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHRNA5P30532 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHRNA5P30532 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHRNA5P30532 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.47■■■□□ 2.47
CHRNA5P30532 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHRNA5P30532 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHRNA5P30532 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHRNA5P30532 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.46■■■□□ 2.47
CHRNA5P30532 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.45■■■□□ 2.47
CHRNA5P30532 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.45■■■□□ 2.47
CHRNA5P30532 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CHRNA5P30532 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CHRNA5P30532 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.45■■■□□ 2.47
CHRNA5P30532 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CHRNA5P30532 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
CHRNA5P30532 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.44■■■□□ 2.46
CHRNA5P30532 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CHRNA5P30532 WHAMMP3-201ENST00000611636 1609 ntBASIC30.44■■■□□ 2.46
CHRNA5P30532 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHRNA5P30532 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHRNA5P30532 AL139246.5-201ENST00000606645 996 ntBASIC30.43■■■□□ 2.46
CHRNA5P30532 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CHRNA5P30532 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CHRNA5P30532 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHRNA5P30532 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.42■■■□□ 2.46
CHRNA5P30532 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.42■■■□□ 2.46
CHRNA5P30532 TSPY9P-201ENST00000440215 945 ntBASIC30.42■■■□□ 2.46
CHRNA5P30532 TSPY11P-201ENST00000442607 1045 ntBASIC30.42■■■□□ 2.46
CHRNA5P30532 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms