Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.53■■■□□ 2.32
CHGBP05060 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.53■■■□□ 2.32
CHGBP05060 AC026202.3-201ENST00000600805 1127 ntBASIC29.53■■■□□ 2.32
CHGBP05060 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.53■■■□□ 2.32
CHGBP05060 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHGBP05060 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHGBP05060 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.52■■■□□ 2.32
CHGBP05060 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.52■■■□□ 2.32
CHGBP05060 AC093536.1-201ENST00000569153 554 ntBASIC29.52■■■□□ 2.32
CHGBP05060 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CHGBP05060 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.52■■■□□ 2.32
CHGBP05060 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CHGBP05060 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.52■■■□□ 2.32
CHGBP05060 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.51■■■□□ 2.32
CHGBP05060 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CHGBP05060 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.51■■■□□ 2.32
CHGBP05060 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHGBP05060 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.51■■■□□ 2.31
CHGBP05060 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CHGBP05060 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHGBP05060 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
CHGBP05060 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CHGBP05060 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHGBP05060 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHGBP05060 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHGBP05060 RP9P-202ENST00000450133 1212 ntBASIC29.49■■■□□ 2.31
CHGBP05060 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHGBP05060 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHGBP05060 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CHGBP05060 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHGBP05060 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHGBP05060 KRT18P60-201ENST00000312876 1297 ntBASIC29.47■■■□□ 2.31
CHGBP05060 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.47■■■□□ 2.31
CHGBP05060 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHGBP05060 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.47■■■□□ 2.31
CHGBP05060 NTF6A-201ENST00000591175 560 ntBASIC29.47■■■□□ 2.31
CHGBP05060 RAP2CP1-202ENST00000605179 643 ntBASIC29.47■■■□□ 2.31
CHGBP05060 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHGBP05060 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHGBP05060 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.46■■■□□ 2.31
CHGBP05060 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHGBP05060 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.46■■■□□ 2.31
CHGBP05060 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHGBP05060 AL592293.1-201ENST00000502889 1188 ntBASIC29.45■■■□□ 2.31
CHGBP05060 AC133552.2-201ENST00000619106 1032 ntBASIC29.45■■■□□ 2.31
CHGBP05060 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CHGBP05060 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CHGBP05060 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.44■■■□□ 2.3
CHGBP05060 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHGBP05060 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CHGBP05060 MIR3960-201ENST00000583311 91 ntBASIC29.44■■■□□ 2.3
CHGBP05060 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHGBP05060 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHGBP05060 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHGBP05060 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.42■■■□□ 2.3
CHGBP05060 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.42■■■□□ 2.3
CHGBP05060 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CHGBP05060 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.42■■■□□ 2.3
CHGBP05060 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CHGBP05060 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC29.41■■■□□ 2.3
CHGBP05060 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.41■■■□□ 2.3
CHGBP05060 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CHGBP05060 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CHGBP05060 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CHGBP05060 SPCS2P3-201ENST00000500401 656 ntBASIC29.4■■■□□ 2.3
CHGBP05060 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.4■■■□□ 2.3
CHGBP05060 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHGBP05060 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHGBP05060 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.39■■■□□ 2.3
CHGBP05060 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CHGBP05060 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC29.38■■■□□ 2.29
CHGBP05060 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
CHGBP05060 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHGBP05060 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHGBP05060 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHGBP05060 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CHGBP05060 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
CHGBP05060 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.38■■■□□ 2.29
CHGBP05060 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.38■■■□□ 2.29
CHGBP05060 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.37■■■□□ 2.29
CHGBP05060 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CHGBP05060 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHGBP05060 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.37■■■□□ 2.29
CHGBP05060 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHGBP05060 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHGBP05060 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHGBP05060 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHGBP05060 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CHGBP05060 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHGBP05060 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.34■■■□□ 2.29
CHGBP05060 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHGBP05060 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
CHGBP05060 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
CHGBP05060 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.32■■■□□ 2.28
CHGBP05060 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHGBP05060 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.32■■■□□ 2.28
CHGBP05060 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.32■■■□□ 2.28
CHGBP05060 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CHGBP05060 AC129492.7-201ENST00000622992 756 ntBASIC29.32■■■□□ 2.28
CHGBP05060 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 218 ms