Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
HLA-DRAP01903 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HLA-DRAP01903 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.33■■□□□ 1.81
HLA-DRAP01903 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.33■■□□□ 1.81
HLA-DRAP01903 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.33■■□□□ 1.81
HLA-DRAP01903 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HLA-DRAP01903 RNF126P1-201ENST00000567452 1320 ntBASIC26.33■■□□□ 1.81
HLA-DRAP01903 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
HLA-DRAP01903 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.8
HLA-DRAP01903 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DRAP01903 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.32■■□□□ 1.8
HLA-DRAP01903 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DRAP01903 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DRAP01903 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
HLA-DRAP01903 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
HLA-DRAP01903 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
HLA-DRAP01903 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.31■■□□□ 1.8
HLA-DRAP01903 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.31■■□□□ 1.8
HLA-DRAP01903 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
HLA-DRAP01903 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
HLA-DRAP01903 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.3■■□□□ 1.8
HLA-DRAP01903 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HLA-DRAP01903 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
HLA-DRAP01903 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DRAP01903 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DRAP01903 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.28■■□□□ 1.8
HLA-DRAP01903 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.28■■□□□ 1.8
HLA-DRAP01903 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DRAP01903 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HLA-DRAP01903 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
HLA-DRAP01903 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.26■■□□□ 1.79
HLA-DRAP01903 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
HLA-DRAP01903 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HLA-DRAP01903 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.26■■□□□ 1.79
HLA-DRAP01903 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
HLA-DRAP01903 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HLA-DRAP01903 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.26■■□□□ 1.79
HLA-DRAP01903 MIR3960-201ENST00000583311 91 ntBASIC26.26■■□□□ 1.79
HLA-DRAP01903 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
HLA-DRAP01903 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
HLA-DRAP01903 AC007029.1-201ENST00000604183 313 ntBASIC26.25■■□□□ 1.79
HLA-DRAP01903 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HLA-DRAP01903 RARRES2P2-201ENST00000394842 485 ntBASIC26.24■■□□□ 1.79
HLA-DRAP01903 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DRAP01903 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DRAP01903 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
HLA-DRAP01903 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DRAP01903 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DRAP01903 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DRAP01903 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DRAP01903 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DRAP01903 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.22■■□□□ 1.79
HLA-DRAP01903 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DRAP01903 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DRAP01903 AC091060.1-201ENST00000623524 1766 ntBASIC26.22■■□□□ 1.79
HLA-DRAP01903 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DRAP01903 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DRAP01903 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.21■■□□□ 1.79
HLA-DRAP01903 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DRAP01903 RP9P-202ENST00000450133 1212 ntBASIC26.21■■□□□ 1.79
HLA-DRAP01903 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.21■■□□□ 1.79
HLA-DRAP01903 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
HLA-DRAP01903 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DRAP01903 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.21■■□□□ 1.79
HLA-DRAP01903 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
HLA-DRAP01903 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
HLA-DRAP01903 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.2■■□□□ 1.78
HLA-DRAP01903 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DRAP01903 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HLA-DRAP01903 AC092803.2-201ENST00000564287 1899 ntBASIC26.19■■□□□ 1.78
HLA-DRAP01903 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.19■■□□□ 1.78
HLA-DRAP01903 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.19■■□□□ 1.78
HLA-DRAP01903 AC093536.1-201ENST00000569153 554 ntBASIC26.19■■□□□ 1.78
HLA-DRAP01903 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HLA-DRAP01903 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
HLA-DRAP01903 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.18■■□□□ 1.78
HLA-DRAP01903 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.17■■□□□ 1.78
HLA-DRAP01903 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DRAP01903 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.17■■□□□ 1.78
HLA-DRAP01903 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.17■■□□□ 1.78
HLA-DRAP01903 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.16■■□□□ 1.78
HLA-DRAP01903 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
HLA-DRAP01903 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
HLA-DRAP01903 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.15■■□□□ 1.78
HLA-DRAP01903 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
HLA-DRAP01903 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
HLA-DRAP01903 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HLA-DRAP01903 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HLA-DRAP01903 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.13■■□□□ 1.77
HLA-DRAP01903 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.13■■□□□ 1.77
HLA-DRAP01903 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.13■■□□□ 1.77
HLA-DRAP01903 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
HLA-DRAP01903 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
HLA-DRAP01903 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
HLA-DRAP01903 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms